Protein–RNA interactions for Protein: Q9UGQ2

CACFD1, Calcium channel flower homolog, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1Q9UGQ2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CACFD1Q9UGQ2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACFD1Q9UGQ2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACFD1Q9UGQ2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CACFD1Q9UGQ2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CACFD1Q9UGQ2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACFD1Q9UGQ2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 LONRF2P2-201ENST00000439212 571 ntBASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.18■□□□□ 0.5
CACFD1Q9UGQ2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.17■□□□□ 0.5
CACFD1Q9UGQ2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 AC019171.1-201ENST00000601251 1056 ntBASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACFD1Q9UGQ2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 AL592293.1-201ENST00000502889 1188 ntBASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CACFD1Q9UGQ2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
CACFD1Q9UGQ2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CACFD1Q9UGQ2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.5
CACFD1Q9UGQ2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.14■□□□□ 0.49
CACFD1Q9UGQ2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms