Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CDC42SE1Q9NRR8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 AC242852.2-201ENST00000615738 1807 ntBASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 AC004812.2-201ENST00000611079 2094 ntBASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 AC139530.1-201ENST00000575312 1977 ntBASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 FBXW4P1-201ENST00000426721 2239 ntBASIC11.54□□□□□ -0.56
CDC42SE1Q9NRR8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CDC42SE1Q9NRR8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
CDC42SE1Q9NRR8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE1Q9NRR8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 AC020916.1-201ENST00000587762 1774 ntBASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CDC42SE1Q9NRR8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms