Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDF2L1Q9HCN8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDF2L1Q9HCN8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDF2L1Q9HCN8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDF2L1Q9HCN8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.33■□□□□ 0.37
SDF2L1Q9HCN8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SDF2L1Q9HCN8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SDF2L1Q9HCN8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SDF2L1Q9HCN8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SDF2L1Q9HCN8 AL161729.1-201ENST00000604104 1402 ntBASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SDF2L1Q9HCN8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
SDF2L1Q9HCN8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDF2L1Q9HCN8 AC005229.4-201ENST00000610085 2198 ntBASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 MIR7108-201ENST00000614319 87 ntBASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDF2L1Q9HCN8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 AC092296.2-201ENST00000589470 999 ntBASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDF2L1Q9HCN8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 FAM99A-202ENST00000538190 1989 ntBASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 ECEL1P2-201ENST00000461596 1295 ntBASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 AC079630.1-202ENST00000618127 1840 ntBASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDF2L1Q9HCN8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 RP9P-202ENST00000450133 1212 ntBASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 AC080038.3-201ENST00000623346 1952 ntBASIC17.27■□□□□ 0.36
SDF2L1Q9HCN8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDF2L1Q9HCN8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms