Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRTM1Q9HBL6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 AC242852.2-201ENST00000615738 1807 ntBASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 AC127496.7-201ENST00000625110 1798 ntBASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRTM1Q9HBL6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
LRTM1Q9HBL6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.33■■□□□ 1
LRTM1Q9HBL6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRTM1Q9HBL6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRTM1Q9HBL6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
LRTM1Q9HBL6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRTM1Q9HBL6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.32■■□□□ 1
LRTM1Q9HBL6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LRTM1Q9HBL6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LRTM1Q9HBL6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.32■■□□□ 1
LRTM1Q9HBL6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LRTM1Q9HBL6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRTM1Q9HBL6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRTM1Q9HBL6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRTM1Q9HBL6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRTM1Q9HBL6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LRTM1Q9HBL6 LINC01529-204ENST00000636474 1715 ntBASIC21.32■■□□□ 1
LRTM1Q9HBL6 LINC00565-201ENST00000562710 2331 ntBASIC21.32■■□□□ 1
LRTM1Q9HBL6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRTM1Q9HBL6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LRTM1Q9HBL6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.31■■□□□ 1
LRTM1Q9HBL6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRTM1Q9HBL6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.31■■□□□ 1
LRTM1Q9HBL6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
LRTM1Q9HBL6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRTM1Q9HBL6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.31■■□□□ 1
LRTM1Q9HBL6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.31■■□□□ 1
LRTM1Q9HBL6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRTM1Q9HBL6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRTM1Q9HBL6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRTM1Q9HBL6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRTM1Q9HBL6 AC092028.1-203ENST00000608262 953 ntBASIC21.3■■□□□ 1
LRTM1Q9HBL6 FP325331.1-202ENST00000623531 1380 ntBASIC21.3■■□□□ 1
LRTM1Q9HBL6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LRTM1Q9HBL6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRTM1Q9HBL6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LRTM1Q9HBL6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRTM1Q9HBL6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LRTM1Q9HBL6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LRTM1Q9HBL6 KRT125P-201ENST00000546827 989 ntBASIC21.29■■□□□ 1
LRTM1Q9HBL6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.29■■□□□ 1
LRTM1Q9HBL6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
LRTM1Q9HBL6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LRTM1Q9HBL6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LRTM1Q9HBL6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRTM1Q9HBL6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LRTM1Q9HBL6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.27■■□□□ 1
LRTM1Q9HBL6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LRTM1Q9HBL6 Z92544.1-202ENST00000571933 1220 ntBASIC21.27■■□□□ 1
LRTM1Q9HBL6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.27■■□□□ 1
LRTM1Q9HBL6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRTM1Q9HBL6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms