Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 DMXL1-208ENST00000509902 577 ntTSL 34.07□□□□□ -1.769e-6■■■■■ 32.4
XRN2Q9H0D6 TFPI-205ENST00000417013 554 ntTSL 24.06□□□□□ -1.761e-10■■■■■ 32.4
XRN2Q9H0D6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.789e-6■■■■■ 32.4
XRN2Q9H0D6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.89e-6■■■■■ 32.4
XRN2Q9H0D6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.829e-6■■■■■ 32.4
XRN2Q9H0D6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.859e-6■■■■■ 32.4
XRN2Q9H0D6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.26□□□□□ -1.899e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-207ENST00000511442 463 ntTSL 32.39□□□□□ -2.031e-6■■■■■ 32.4
XRN2Q9H0D6 RELT-205ENST00000544075 744 ntTSL 326.01■■□□□ 1.755e-8■■■■■ 32.4
XRN2Q9H0D6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.755e-8■■■■■ 32.4
XRN2Q9H0D6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.145e-8■■■■■ 32.4
XRN2Q9H0D6 RELT-207ENST00000545886 4346 ntTSL 213.59□□□□□ -0.235e-8■■■■■ 32.4
XRN2Q9H0D6 COQ8A-209ENST00000489044 941 ntTSL 321.92■■□□□ 1.12e-6■■■■■ 32.4
XRN2Q9H0D6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.292e-6■■■■■ 32.4
XRN2Q9H0D6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.19■□□□□ 0.182e-6■■■■■ 32.4
XRN2Q9H0D6 COQ8A-205ENST00000478406 3612 ntTSL 214.72□□□□□ -0.052e-6■■■■■ 32.4
XRN2Q9H0D6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.112e-6■■■■■ 32.4
XRN2Q9H0D6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.165e-7■■■■■ 32.3
XRN2Q9H0D6 ARRDC3-205ENST00000508948 564 ntTSL 49.81□□□□□ -0.846e-13■■■■■ 32.3
XRN2Q9H0D6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.356e-13■■■■■ 32.3
XRN2Q9H0D6 ARRDC3-204ENST00000507075 355 ntTSL 22.09□□□□□ -2.076e-13■■■■■ 32.3
XRN2Q9H0D6 SPESP1-202ENST00000560188 621 ntTSL 214.57□□□□□ -0.084e-9■■■■■ 32.2
XRN2Q9H0D6 LRP8-209ENST00000480045 3231 ntTSL 518.64■□□□□ 0.581e-8■■■■■ 32.2
XRN2Q9H0D6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.51e-8■■■■■ 32.2
XRN2Q9H0D6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.83■□□□□ 0.281e-8■■■■■ 32.2
XRN2Q9H0D6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.73□□□□□ -0.051e-8■■■■■ 32.2
XRN2Q9H0D6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.071e-8■■■■■ 32.2
XRN2Q9H0D6 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.32□□□□□ -0.281e-8■■■■■ 32.2
XRN2Q9H0D6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.06■■□□□ 1.121e-6■■■■■ 32.2
XRN2Q9H0D6 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.331e-6■■■■■ 32.2
XRN2Q9H0D6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.553e-15■■■■■ 32.2
XRN2Q9H0D6 HP1BP3-209ENST00000437575 473 ntTSL 330■■■□□ 2.395e-11■■■■■ 32.1
XRN2Q9H0D6 HP1BP3-210ENST00000438032 1159 ntTSL 524.95■■□□□ 1.585e-11■■■■■ 32.1
XRN2Q9H0D6 HP1BP3-208ENST00000424732 970 ntTSL 321.9■■□□□ 1.15e-11■■■■■ 32.1
XRN2Q9H0D6 TJP1-210ENST00000558447 720 ntTSL 329.84■■■□□ 2.371e-6■■■■■ 32.1
XRN2Q9H0D6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.95■□□□□ 0.621e-6■■■■■ 32.1
XRN2Q9H0D6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.271e-6■■■■■ 32.1
XRN2Q9H0D6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.161e-6■■■■■ 32.1
XRN2Q9H0D6 TJP1-206ENST00000473741 270 ntTSL 22.17□□□□□ -2.061e-6■■■■■ 32.1
XRN2Q9H0D6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.591e-15■■■■■ 32.1
XRN2Q9H0D6 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.941e-15■■■■■ 32.1
XRN2Q9H0D6 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.041e-15■■■■■ 32.1
XRN2Q9H0D6 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)7.3□□□□□ -1.245e-8■■■■■ 32.1
XRN2Q9H0D6 ATXN1-208ENST00000492857 647 ntTSL 45.14□□□□□ -1.595e-8■■■■■ 32.1
XRN2Q9H0D6 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)3.37□□□□□ -1.875e-8■■■■■ 32.1
XRN2Q9H0D6 MIR663AHG-228ENST00000608487 486 ntTSL 527.59■■■□□ 2.017e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.59■■■□□ 2.017e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-222ENST00000600263 751 ntTSL 527.59■■■□□ 2.017e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.45■■□□□ 1.987e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-223ENST00000601079 613 ntTSL 526.88■■□□□ 1.897e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-206ENST00000594150 693 ntTSL 525.62■■□□□ 1.697e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-216ENST00000597979 568 ntTSL 524.77■■□□□ 1.567e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-236ENST00000610014 475 ntTSL 524.19■■□□□ 1.467e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-217ENST00000598150 751 ntTSL 519.23■□□□□ 0.677e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-221ENST00000600225 473 ntTSL 517.15■□□□□ 0.347e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.97■□□□□ 0.317e-7■■■■■ 32
XRN2Q9H0D6 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC12.8□□□□□ -0.367e-7■■■■■ 32
XRN2Q9H0D6 SMPD4-207ENST00000435455 842 ntTSL 519.09■□□□□ 0.651e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.341e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-204ENST00000430682 820 ntTSL 314.95□□□□□ -0.021e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-217ENST00000473720 555 ntTSL 414.44□□□□□ -0.11e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-212ENST00000451542 796 ntTSL 514.03□□□□□ -0.161e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-208ENST00000439029 566 ntTSL 412.49□□□□□ -0.411e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC11.96□□□□□ -0.51e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-213ENST00000454468 3586 ntTSL 1 (best)11.93□□□□□ -0.51e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-209ENST00000439886 3371 ntTSL 210.92□□□□□ -0.661e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-206ENST00000433118 3335 ntTSL 510.56□□□□□ -0.721e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC10.49□□□□□ -0.731e-6■■■■■ 32
XRN2Q9H0D6 SMPD4-203ENST00000412570 3601 ntTSL 210.46□□□□□ -0.731e-6■■■■■ 32
XRN2Q9H0D6 SLC25A36-206ENST00000502756 796 ntTSL 229.55■■■□□ 2.326e-7■■■■■ 32
XRN2Q9H0D6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.914e-6■■■■■ 32
XRN2Q9H0D6 SLC25A36-202ENST00000393015 659 ntTSL 523.7■■□□□ 1.386e-7■■■■■ 32
XRN2Q9H0D6 SLC25A36-214ENST00000515813 738 ntTSL 221.91■■□□□ 1.16e-7■■■■■ 32
XRN2Q9H0D6 SLC25A36-205ENST00000502594 1163 ntTSL 1 (best)21.43■■□□□ 1.026e-7■■■■■ 32
XRN2Q9H0D6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.97■□□□□ 0.796e-25■■■■■ 32
XRN2Q9H0D6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.516e-7■■■■■ 32
XRN2Q9H0D6 SLC25A36-215ENST00000631654 620 ntTSL 516.87■□□□□ 0.296e-25■■■■■ 32
XRN2Q9H0D6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.16e-7■■■■■ 32
XRN2Q9H0D6 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC11.52□□□□□ -0.566e-7■■■■■ 32
XRN2Q9H0D6 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC10.68□□□□□ -0.74e-6■■■■■ 32
XRN2Q9H0D6 PLXNB2-203ENST00000425954 609 ntTSL 220.68■□□□□ 0.93e-7■■■■■ 32
XRN2Q9H0D6 IQSEC1-203ENST00000474467 436 ntTSL 39.65□□□□□ -0.867e-7■■■■■ 32
XRN2Q9H0D6 TPM4-204ENST00000586499 708 ntTSL 422.57■■□□□ 1.22e-6■■■■■ 31.9
XRN2Q9H0D6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.12■■□□□ 1.133e-6■■■■■ 31.9
XRN2Q9H0D6 TPM4-206ENST00000587201 877 ntTSL 221.06■□□□□ 0.963e-6■■■■■ 31.9
XRN2Q9H0D6 TPM4-205ENST00000586833 558 ntTSL 516.34■□□□□ 0.213e-6■■■■■ 31.9
XRN2Q9H0D6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.183e-6■■■■■ 31.9
XRN2Q9H0D6 TPM4-210ENST00000588507 367 ntTSL 39.49□□□□□ -0.893e-6■■■■■ 31.9
XRN2Q9H0D6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.65■■■□□ 2.181e-6■■■■■ 31.8
XRN2Q9H0D6 ELK4-204ENST00000616704 2535 ntTSL 224.65■■□□□ 1.541e-6■■■■■ 31.8
XRN2Q9H0D6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.984e-10■■■■■ 31.8
XRN2Q9H0D6 SBNO2-205ENST00000587655 914 ntTSL 319.6■□□□□ 0.733e-6■■■■■ 31.8
XRN2Q9H0D6 RPH3AL-212ENST00000573780 531 ntTSL 417.93■□□□□ 0.463e-6■■■■■ 31.8
XRN2Q9H0D6 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.93■□□□□ 0.34e-10■■■■■ 31.8
XRN2Q9H0D6 CDIP1-203ENST00000562579 577 ntTSL 515.93■□□□□ 0.142e-6■■■■■ 31.8
XRN2Q9H0D6 RPL3-211ENST00000465618 2108 ntTSL 1 (best)15.66■□□□□ 0.14e-10■■■■■ 31.8
XRN2Q9H0D6 CDIP1-211ENST00000586768 548 ntTSL 415.54■□□□□ 0.082e-6■■■■■ 31.8
XRN2Q9H0D6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.221e-6■■■■■ 31.8
XRN2Q9H0D6 TCF25-222ENST00000568412 797 ntTSL 320.71■□□□□ 0.914e-6■■■■■ 31.8
XRN2Q9H0D6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.442e-6■■■■■ 31.8
Retrieved 100 of 21,068 protein–RNA pairs in 230.5 ms