RNA–Protein interactions for RNA: ENST00000508948.5

ARRDC3-205, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-205ENST00000508948 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
ARRDC3-205ENST00000508948 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
ARRDC3-205ENST00000508948 ABCC9O60706 1549 aa17.75■□□□□ 0.43
ARRDC3-205ENST00000508948 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
ARRDC3-205ENST00000508948 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
ARRDC3-205ENST00000508948 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
ARRDC3-205ENST00000508948 NACADO15069 1562 aa17.02■□□□□ 0.31
ARRDC3-205ENST00000508948 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
ARRDC3-205ENST00000508948 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
ARRDC3-205ENST00000508948 UNC13AQ9UPW8 1703 aa16.69■□□□□ 0.26
ARRDC3-205ENST00000508948 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
ARRDC3-205ENST00000508948 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
ARRDC3-205ENST00000508948 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
ARRDC3-205ENST00000508948 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
ARRDC3-205ENST00000508948 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
ARRDC3-205ENST00000508948 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
ARRDC3-205ENST00000508948 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
ARRDC3-205ENST00000508948 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
ARRDC3-205ENST00000508948 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
ARRDC3-205ENST00000508948 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
ARRDC3-205ENST00000508948 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
ARRDC3-205ENST00000508948 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
ARRDC3-205ENST00000508948 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
ARRDC3-205ENST00000508948 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
ARRDC3-205ENST00000508948 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
ARRDC3-205ENST00000508948 WIZO95785 1651 aa15.65■□□□□ 0.1
ARRDC3-205ENST00000508948 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
ARRDC3-205ENST00000508948 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
ARRDC3-205ENST00000508948 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
ARRDC3-205ENST00000508948 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
ARRDC3-205ENST00000508948 NESP48681 1621 aa15.4■□□□□ 0.06
ARRDC3-205ENST00000508948 SUPT5HO00267 1087 aaKnown RBP15.35■□□□□ 0.05
ARRDC3-205ENST00000508948 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
ARRDC3-205ENST00000508948 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
ARRDC3-205ENST00000508948 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
ARRDC3-205ENST00000508948 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
ARRDC3-205ENST00000508948 CFTRP13569 1480 aa15.2■□□□□ 0.02
ARRDC3-205ENST00000508948 KIF21AQ7Z4S6 1674 aa15.18■□□□□ 0.02
ARRDC3-205ENST00000508948 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
ARRDC3-205ENST00000508948 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
ARRDC3-205ENST00000508948 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
ARRDC3-205ENST00000508948 CEP164Q9UPV0 1460 aa15.07■□□□□ 0
ARRDC3-205ENST00000508948 PRDM2Q13029 1718 aa15.05■□□□□ -0
ARRDC3-205ENST00000508948 MRC2Q9UBG0 1479 aa15.04■□□□□ -0
ARRDC3-205ENST00000508948 CUX2O14529 1486 aa15.02■□□□□ -0
ARRDC3-205ENST00000508948 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
ARRDC3-205ENST00000508948 WDR62O43379 1518 aa14.97□□□□□ -0.01
ARRDC3-205ENST00000508948 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
ARRDC3-205ENST00000508948 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
ARRDC3-205ENST00000508948 CUX1P39880 1505 aa14.82□□□□□ -0.04
ARRDC3-205ENST00000508948 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
ARRDC3-205ENST00000508948 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
ARRDC3-205ENST00000508948 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
ARRDC3-205ENST00000508948 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
ARRDC3-205ENST00000508948 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
ARRDC3-205ENST00000508948 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
ARRDC3-205ENST00000508948 WRNQ14191 1432 aaPredicted RBP eCLIP14.72□□□□□ -0.05
ARRDC3-205ENST00000508948 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
ARRDC3-205ENST00000508948 SOGA1O94964 1423 aa14.71□□□□□ -0.05
ARRDC3-205ENST00000508948 SYNJ1O43426 1573 aa14.71□□□□□ -0.05
ARRDC3-205ENST00000508948 TOP2BQ02880 1626 aa14.67□□□□□ -0.06
ARRDC3-205ENST00000508948 AQRO60306 1485 aaKnown RBP eCLIP14.67□□□□□ -0.064e-8■■■■■ 28.5
ARRDC3-205ENST00000508948 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
ARRDC3-205ENST00000508948 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
ARRDC3-205ENST00000508948 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
ARRDC3-205ENST00000508948 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
ARRDC3-205ENST00000508948 ABCA10Q8WWZ4 1543 aa14.58□□□□□ -0.08
ARRDC3-205ENST00000508948 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
ARRDC3-205ENST00000508948 GAPVD1Q14C86 1478 aa14.53□□□□□ -0.08
ARRDC3-205ENST00000508948 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.09
ARRDC3-205ENST00000508948 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
ARRDC3-205ENST00000508948 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
ARRDC3-205ENST00000508948 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
ARRDC3-205ENST00000508948 FBLN2P98095 1184 aa14.48□□□□□ -0.09
ARRDC3-205ENST00000508948 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
ARRDC3-205ENST00000508948 CHD1O14646 1710 aa14.45□□□□□ -0.1
ARRDC3-205ENST00000508948 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
ARRDC3-205ENST00000508948 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
ARRDC3-205ENST00000508948 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
ARRDC3-205ENST00000508948 SYNJ2O15056 1496 aa14.39□□□□□ -0.11
ARRDC3-205ENST00000508948 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
ARRDC3-205ENST00000508948 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
ARRDC3-205ENST00000508948 ERICH3Q5RHP9 1530 aa14.38□□□□□ -0.11
ARRDC3-205ENST00000508948 ADAMTS12P58397 1594 aa14.38□□□□□ -0.11
ARRDC3-205ENST00000508948 IGF1RP08069 1367 aa14.37□□□□□ -0.11
ARRDC3-205ENST00000508948 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
ARRDC3-205ENST00000508948 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
ARRDC3-205ENST00000508948 GRIN2AQ12879 1464 aa14.32□□□□□ -0.12
ARRDC3-205ENST00000508948 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
ARRDC3-205ENST00000508948 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
ARRDC3-205ENST00000508948 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
ARRDC3-205ENST00000508948 CUL7Q14999 1698 aa14.26□□□□□ -0.13
ARRDC3-205ENST00000508948 NUP160Q12769 1436 aa14.25□□□□□ -0.13
ARRDC3-205ENST00000508948 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
ARRDC3-205ENST00000508948 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
ARRDC3-205ENST00000508948 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
ARRDC3-205ENST00000508948 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
ARRDC3-205ENST00000508948 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
ARRDC3-205ENST00000508948 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
ARRDC3-205ENST00000508948 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms