RNA–Protein interactions for RNA: ENST00000507075.1

ARRDC3-204, Transcript of arrestin domain containing 3, human

TSL 2

Gene ARRDC3, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARRDC3-204	ENST00000507075	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.07	■□□□□ 0.96
ARRDC3-204	ENST00000507075	CHIC1	Q5VXU3	224 aa		19.56	■□□□□ 0.72
ARRDC3-204	ENST00000507075	SENP3	Q9H4L4	574 aa	Predicted RBP	17.97	■□□□□ 0.47
ARRDC3-204	ENST00000507075	PHF23	Q9BUL5	403 aa	Predicted RBP	17.67	■□□□□ 0.42
ARRDC3-204	ENST00000507075	POTED	Q86YR6	584 aa		16.99	■□□□□ 0.31
ARRDC3-204	ENST00000507075	FOXD1	Q16676	465 aa		16.89	■□□□□ 0.29
ARRDC3-204	ENST00000507075	MSH5	O43196	834 aa		15.99	■□□□□ 0.15
ARRDC3-204	ENST00000507075	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.61	■□□□□ 0.09
ARRDC3-204	ENST00000507075	PPP6R1	Q9UPN7	881 aa		15.31	■□□□□ 0.04
ARRDC3-204	ENST00000507075	ADRA2B	P18089	450 aa		15.21	■□□□□ 0.03
ARRDC3-204	ENST00000507075	PLPPR3	Q6T4P5	718 aa		15.08	■□□□□ 0
ARRDC3-204	ENST00000507075	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.19	□□□□□ -0.14
ARRDC3-204	ENST00000507075	DMRT2	Q9Y5R5	561 aa		14.17	□□□□□ -0.14
ARRDC3-204	ENST00000507075	CACNB1	Q02641	598 aa	Predicted RBP	14.16	□□□□□ -0.14
ARRDC3-204	ENST00000507075	SCAF1	Q9H7N4	1312 aa	Known RBP	13.79	□□□□□ -0.2
ARRDC3-204	ENST00000507075	DCAF8L1	A6NGE4	600 aa		13.63	□□□□□ -0.23
ARRDC3-204	ENST00000507075	RNF39	Q9H2S5	420 aa		13.63	□□□□□ -0.23
ARRDC3-204	ENST00000507075	HOXD11	P31277	338 aa	Predicted RBP	13.39	□□□□□ -0.27
ARRDC3-204	ENST00000507075	C1QBP	Q07021	282 aa	Known RBP	13.34	□□□□□ -0.27
ARRDC3-204	ENST00000507075	PPP4R3CP	Q6ZMV5	832 aa		13.16	□□□□□ -0.3
ARRDC3-204	ENST00000507075	POTEH	Q6S545	545 aa		13.12	□□□□□ -0.31
ARRDC3-204	ENST00000507075	RNF216	Q9NWF9	866 aa	Predicted RBP	13.09	□□□□□ -0.31
ARRDC3-204	ENST00000507075	CNKSR2	Q8WXI2	1034 aa		13.04	□□□□□ -0.32
ARRDC3-204	ENST00000507075	DNAJC5B	Q9UF47	199 aa		12.99	□□□□□ -0.33
ARRDC3-204	ENST00000507075	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.73	□□□□□ -0.37	7e-6	■□□□□ 10.8
ARRDC3-204	ENST00000507075	DSG3	P32926	999 aa		12.55	□□□□□ -0.4
ARRDC3-204	ENST00000507075	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.48	□□□□□ -0.41
ARRDC3-204	ENST00000507075		U3KPZ7	1027 aa	Predicted RBP	12.45	□□□□□ -0.42
ARRDC3-204	ENST00000507075	CAPN15	O75808	1086 aa		12.44	□□□□□ -0.42
ARRDC3-204	ENST00000507075	NCBP3	Q53F19	620 aa	Known RBP	12.38	□□□□□ -0.43
ARRDC3-204	ENST00000507075	NPM3	O75607	178 aa	Known RBP	12.29	□□□□□ -0.44
ARRDC3-204	ENST00000507075	ABCB7	O75027	752 aa		12.15	□□□□□ -0.46
ARRDC3-204	ENST00000507075	TRH	P20396	242 aa	Predicted RBP	12.09	□□□□□ -0.47
ARRDC3-204	ENST00000507075	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12	□□□□□ -0.49
ARRDC3-204	ENST00000507075	CHRDL2	Q6WN34	429 aa		11.98	□□□□□ -0.49
ARRDC3-204	ENST00000507075	SLC4A2	P04920	1241 aa		11.93	□□□□□ -0.5
ARRDC3-204	ENST00000507075	RBM42	Q9BTD8	480 aa	Known RBP	11.92	□□□□□ -0.5
ARRDC3-204	ENST00000507075	APLP2	Q06481	763 aa		11.89	□□□□□ -0.51
ARRDC3-204	ENST00000507075	SP7	Q8TDD2	431 aa	Predicted RBP	11.89	□□□□□ -0.51
ARRDC3-204	ENST00000507075	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.74	□□□□□ -0.53
ARRDC3-204	ENST00000507075	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.74	□□□□□ -0.53
ARRDC3-204	ENST00000507075	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.68	□□□□□ -0.54
ARRDC3-204	ENST00000507075	POLA2	Q14181	598 aa		11.6	□□□□□ -0.55
ARRDC3-204	ENST00000507075	PIP4P2	Q8N4L2	257 aa		11.57	□□□□□ -0.56
ARRDC3-204	ENST00000507075	AKT1S1	Q96B36	256 aa		11.52	□□□□□ -0.57
ARRDC3-204	ENST00000507075	HAX1	O00165	279 aa		11.5	□□□□□ -0.57
ARRDC3-204	ENST00000507075	KCNA4	P22459	653 aa		11.49	□□□□□ -0.57
ARRDC3-204	ENST00000507075	REM2	Q8IYK8	340 aa	Predicted RBP	11.45	□□□□□ -0.58
ARRDC3-204	ENST00000507075	EVX2	Q03828	476 aa		11.39	□□□□□ -0.59
ARRDC3-204	ENST00000507075	PITPNM1	O00562	1244 aa		11.37	□□□□□ -0.59
ARRDC3-204	ENST00000507075	FXR2	P51116	673 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
ARRDC3-204	ENST00000507075	MYCN	P04198	464 aa	Predicted RBP	11.35	□□□□□ -0.59
ARRDC3-204	ENST00000507075	OSCAR	Q8IYS5	282 aa		11.31	□□□□□ -0.6
ARRDC3-204	ENST00000507075	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.25	□□□□□ -0.61
ARRDC3-204	ENST00000507075	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.22	□□□□□ -0.61
ARRDC3-204	ENST00000507075	LHX8	Q68G74	356 aa		11.14	□□□□□ -0.63
ARRDC3-204	ENST00000507075	PLSCR2	Q9NRY7	297 aa		11.09	□□□□□ -0.63
ARRDC3-204	ENST00000507075	GABBR2	O75899	941 aa		11.05	□□□□□ -0.64
ARRDC3-204	ENST00000507075	C19orf67	A6NJJ6	358 aa		11.04	□□□□□ -0.64
ARRDC3-204	ENST00000507075	PRKAR2A	P13861	404 aa	Known RBP	11.04	□□□□□ -0.64
ARRDC3-204	ENST00000507075	CLEC11A	Q9Y240	323 aa		10.91	□□□□□ -0.66
ARRDC3-204	ENST00000507075	SPDYE2B	A6NHP3	402 aa		10.89	□□□□□ -0.67
ARRDC3-204	ENST00000507075	SPDYE6	P0CI01	402 aa		10.89	□□□□□ -0.67
ARRDC3-204	ENST00000507075	SPDYE2	Q495Y8	402 aa		10.89	□□□□□ -0.67
ARRDC3-204	ENST00000507075	FOXD4L1	Q9NU39	408 aa		10.88	□□□□□ -0.67
ARRDC3-204	ENST00000507075	POTEI	P0CG38	1075 aa		10.85	□□□□□ -0.67
ARRDC3-204	ENST00000507075	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.85	□□□□□ -0.67
ARRDC3-204	ENST00000507075	CHADL	Q6NUI6	762 aa		10.82	□□□□□ -0.68
ARRDC3-204	ENST00000507075	FBLN2	P98095	1184 aa		10.71	□□□□□ -0.69
ARRDC3-204	ENST00000507075	SSUH2	Q9Y2M2	353 aa		10.71	□□□□□ -0.69
ARRDC3-204	ENST00000507075	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.67	□□□□□ -0.7
ARRDC3-204	ENST00000507075	MKRN4P	Q13434	485 aa	Predicted RBP	10.66	□□□□□ -0.7
ARRDC3-204	ENST00000507075	ZNF692	Q9BU19	519 aa	Predicted RBP	10.66	□□□□□ -0.7
ARRDC3-204	ENST00000507075	CD44	P16070	742 aa	Known RBP	10.65	□□□□□ -0.7
ARRDC3-204	ENST00000507075	PRR29	P0C7W0	189 aa		10.6	□□□□□ -0.71
ARRDC3-204	ENST00000507075	ZBTB22	O15209	634 aa		10.59	□□□□□ -0.71
ARRDC3-204	ENST00000507075	ATXN8OS	P0DMR3	200 aa		10.56	□□□□□ -0.72
ARRDC3-204	ENST00000507075	DCBLD2	Q96PD2	775 aa		10.56	□□□□□ -0.72
ARRDC3-204	ENST00000507075	OTUD5	Q96G74	571 aa		10.55	□□□□□ -0.72
ARRDC3-204	ENST00000507075	POTEM	A6NI47	508 aa		10.54	□□□□□ -0.72
ARRDC3-204	ENST00000507075	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.54	□□□□□ -0.72
ARRDC3-204	ENST00000507075	CLCN6	P51797	869 aa		10.52	□□□□□ -0.73
ARRDC3-204	ENST00000507075	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
ARRDC3-204	ENST00000507075	POTEG	Q6S5H5	508 aa		10.49	□□□□□ -0.73
ARRDC3-204	ENST00000507075	POTEB2	H3BUK9	544 aa		10.48	□□□□□ -0.73
ARRDC3-204	ENST00000507075	PCDH10	Q9P2E7	1040 aa		10.46	□□□□□ -0.73
ARRDC3-204	ENST00000507075	ZNF579	Q8NAF0	562 aa	Known RBP	10.45	□□□□□ -0.74
ARRDC3-204	ENST00000507075	GALR2	O43603	387 aa	Predicted RBP	10.41	□□□□□ -0.74
ARRDC3-204	ENST00000507075	ZRANB1	Q9UGI0	708 aa		10.39	□□□□□ -0.75
ARRDC3-204	ENST00000507075	PELP1	Q8IZL8	1130 aa	Known RBP	10.28	□□□□□ -0.76
ARRDC3-204	ENST00000507075	LCE2D	Q5TA82	110 aa	Predicted RBP	10.26	□□□□□ -0.77
ARRDC3-204	ENST00000507075	PHF12	Q96QT6	1004 aa		10.24	□□□□□ -0.77
ARRDC3-204	ENST00000507075	CREBZF	Q9NS37	354 aa		10.24	□□□□□ -0.77
ARRDC3-204	ENST00000507075	POTEJ	P0CG39	1038 aa		10.23	□□□□□ -0.77
ARRDC3-204	ENST00000507075	METRN	Q9UJH8	293 aa		10.17	□□□□□ -0.78
ARRDC3-204	ENST00000507075	FAM163A	Q96GL9	167 aa	Predicted RBP	10.12	□□□□□ -0.79
ARRDC3-204	ENST00000507075	ASTL	Q6HA08	431 aa	Predicted RBP	10.11	□□□□□ -0.79
ARRDC3-204	ENST00000507075	PAK3	O75914	559 aa	Predicted RBP	10.1	□□□□□ -0.79
ARRDC3-204	ENST00000507075	ATMIN	O43313	823 aa	Predicted RBP	10.08	□□□□□ -0.8
ARRDC3-204	ENST00000507075	MAMSTR	Q6ZN01	415 aa		10.08	□□□□□ -0.8

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