RNA–Protein interactions for RNA: ENST00000265138.3

ARRDC3-201, Transcript of arrestin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARRDC3, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-201ENST00000265138 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
ARRDC3-201ENST00000265138 MYT1Q01538 1121 aa12.25□□□□□ -0.45
ARRDC3-201ENST00000265138 HRCP23327 699 aa11.85□□□□□ -0.51
ARRDC3-201ENST00000265138 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
ARRDC3-201ENST00000265138 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
ARRDC3-201ENST00000265138 PCGF6Q9BYE7 350 aa11.38□□□□□ -0.59
ARRDC3-201ENST00000265138 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
ARRDC3-201ENST00000265138 SCAF1Q9H7N4 1312 aaKnown RBP11.31□□□□□ -0.6
ARRDC3-201ENST00000265138 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
ARRDC3-201ENST00000265138 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
ARRDC3-201ENST00000265138 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.63
ARRDC3-201ENST00000265138 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
ARRDC3-201ENST00000265138 ERICH6Q7L0X2 663 aa10.99□□□□□ -0.65
ARRDC3-201ENST00000265138 GTF3C3Q9Y5Q9 886 aa10.99□□□□□ -0.65
ARRDC3-201ENST00000265138 BCL11AQ9H165 835 aa10.94□□□□□ -0.66
ARRDC3-201ENST00000265138 DCAF1Q9Y4B6 1507 aa10.94□□□□□ -0.66
ARRDC3-201ENST00000265138 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
ARRDC3-201ENST00000265138 NEUROD1Q13562 356 aa10.9□□□□□ -0.67
ARRDC3-201ENST00000265138 CHIC1Q5VXU3 224 aa10.83□□□□□ -0.68
ARRDC3-201ENST00000265138 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
ARRDC3-201ENST00000265138 PRKCSHP14314 528 aaPredicted RBP10.77□□□□□ -0.69
ARRDC3-201ENST00000265138 MYO15BQ96JP2 1530 aa10.76□□□□□ -0.69
ARRDC3-201ENST00000265138 ANP32EQ9BTT0 268 aa10.75□□□□□ -0.69
ARRDC3-201ENST00000265138 FAM9AQ8IZU1 332 aaPredicted RBP10.72□□□□□ -0.69
ARRDC3-201ENST00000265138 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
ARRDC3-201ENST00000265138 SHROOM4Q9ULL8 1493 aa10.66□□□□□ -0.7
ARRDC3-201ENST00000265138 CLSPNQ9HAW4 1339 aa10.64□□□□□ -0.71
ARRDC3-201ENST00000265138 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
ARRDC3-201ENST00000265138 APLP2Q06481 763 aa10.55□□□□□ -0.72
ARRDC3-201ENST00000265138 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
ARRDC3-201ENST00000265138 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
ARRDC3-201ENST00000265138 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
ARRDC3-201ENST00000265138 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
ARRDC3-201ENST00000265138 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
ARRDC3-201ENST00000265138 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
ARRDC3-201ENST00000265138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
ARRDC3-201ENST00000265138 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
ARRDC3-201ENST00000265138 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
ARRDC3-201ENST00000265138 MIER1Q8N108 512 aa10.26□□□□□ -0.77
ARRDC3-201ENST00000265138 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
ARRDC3-201ENST00000265138 NEFLP07196 543 aa10.22□□□□□ -0.77
ARRDC3-201ENST00000265138 RBM19Q9Y4C8 960 aaKnown RBP10.15□□□□□ -0.78
ARRDC3-201ENST00000265138 UBE2Q2Q8WVN8 375 aa10.13□□□□□ -0.79
ARRDC3-201ENST00000265138 ANO8Q9HCE9 1232 aaPredicted RBP10.12□□□□□ -0.79
ARRDC3-201ENST00000265138 DEKP35659 375 aaKnown RBP10.11□□□□□ -0.79
ARRDC3-201ENST00000265138 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
ARRDC3-201ENST00000265138 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
ARRDC3-201ENST00000265138 BCANQ96GW7 911 aa10.07□□□□□ -0.8
ARRDC3-201ENST00000265138 FANCIQ9NVI1 1328 aa10.05□□□□□ -0.8
ARRDC3-201ENST00000265138 FKBP8Q14318 412 aa10.05□□□□□ -0.8
ARRDC3-201ENST00000265138 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
ARRDC3-201ENST00000265138 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
ARRDC3-201ENST00000265138 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
ARRDC3-201ENST00000265138 GLIPR1L2Q4G1C9 344 aa9.99□□□□□ -0.81
ARRDC3-201ENST00000265138 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
ARRDC3-201ENST00000265138 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
ARRDC3-201ENST00000265138 ZCCHC6Q5VYS8 1495 aaKnown RBP9.94□□□□□ -0.82
ARRDC3-201ENST00000265138 MSH5O43196 834 aa9.93□□□□□ -0.82
ARRDC3-201ENST00000265138 CCDC136Q96JN2 1154 aa9.93□□□□□ -0.82
ARRDC3-201ENST00000265138 PKNOX2Q96KN3 472 aa9.93□□□□□ -0.82
ARRDC3-201ENST00000265138 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
ARRDC3-201ENST00000265138 NBR1Q14596 966 aa9.87□□□□□ -0.83
ARRDC3-201ENST00000265138 NOP58Q9Y2X3 529 aaKnown RBP9.87□□□□□ -0.83
ARRDC3-201ENST00000265138 ITGAEP38570 1179 aa9.86□□□□□ -0.83
ARRDC3-201ENST00000265138 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.86□□□□□ -0.83
ARRDC3-201ENST00000265138 ANP32AP39687 249 aaKnown RBP9.82□□□□□ -0.84
ARRDC3-201ENST00000265138 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
ARRDC3-201ENST00000265138 HNRNPUL2Q1KMD3 747 aaKnown RBP9.8□□□□□ -0.84
ARRDC3-201ENST00000265138 PODXL2Q9NZ53 605 aa9.79□□□□□ -0.84
ARRDC3-201ENST00000265138 WRNQ14191 1432 aaPredicted RBP eCLIP9.79□□□□□ -0.84
ARRDC3-201ENST00000265138 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
ARRDC3-201ENST00000265138 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
ARRDC3-201ENST00000265138 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
ARRDC3-201ENST00000265138 USP35Q9P2H5 1018 aa9.73□□□□□ -0.85
ARRDC3-201ENST00000265138 PPP4R2Q9NY27 417 aa9.72□□□□□ -0.85
ARRDC3-201ENST00000265138 ANP32CO43423 234 aa9.71□□□□□ -0.86
ARRDC3-201ENST00000265138 CCER2I3L3R5 266 aa9.69□□□□□ -0.86
ARRDC3-201ENST00000265138 IPO9Q96P70 1041 aaKnown RBP9.68□□□□□ -0.86
ARRDC3-201ENST00000265138 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
ARRDC3-201ENST00000265138 NEFMP07197 916 aa9.67□□□□□ -0.86
ARRDC3-201ENST00000265138 C11orf95C9JLR9 678 aaPredicted RBP9.67□□□□□ -0.86
ARRDC3-201ENST00000265138 TRIM52Q96A61 297 aa9.67□□□□□ -0.86
ARRDC3-201ENST00000265138 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
ARRDC3-201ENST00000265138 CEP162Q5TB80 1403 aa9.64□□□□□ -0.87
ARRDC3-201ENST00000265138 UBTFP17480 764 aaKnown RBP9.64□□□□□ -0.87
ARRDC3-201ENST00000265138 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
ARRDC3-201ENST00000265138 PLEKHG5O94827 1062 aa9.6□□□□□ -0.87
ARRDC3-201ENST00000265138 DDX10Q13206 875 aaKnown RBP9.6□□□□□ -0.87
ARRDC3-201ENST00000265138 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
ARRDC3-201ENST00000265138 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
ARRDC3-201ENST00000265138 ZMYND15Q9H091 742 aa9.59□□□□□ -0.87
ARRDC3-201ENST00000265138 WASHC2AQ641Q2 1341 aa9.58□□□□□ -0.88
ARRDC3-201ENST00000265138 IRX6P78412 446 aaPredicted RBP9.58□□□□□ -0.88
ARRDC3-201ENST00000265138 HNRNPUQ00839 825 aaKnown RBP eCLIP9.57□□□□□ -0.88
ARRDC3-201ENST00000265138 EEA1Q15075 1411 aa9.57□□□□□ -0.88
ARRDC3-201ENST00000265138 FAM43AQ8N2R8 423 aa9.57□□□□□ -0.88
ARRDC3-201ENST00000265138 WASHC2CQ9Y4E1 1318 aa9.56□□□□□ -0.88
ARRDC3-201ENST00000265138 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
ARRDC3-201ENST00000265138 GSE1Q14687 1217 aa9.56□□□□□ -0.88
ARRDC3-201ENST00000265138 HSP90AA2PQ14568 343 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms