RNA–Protein interactions for RNA: ENST00000562579.5

CDIP1-203, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-203ENST00000562579 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
CDIP1-203ENST00000562579 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
CDIP1-203ENST00000562579 ABCC9O60706 1549 aa28.42■■■□□ 2.14
CDIP1-203ENST00000562579 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
CDIP1-203ENST00000562579 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
CDIP1-203ENST00000562579 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
CDIP1-203ENST00000562579 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
CDIP1-203ENST00000562579 NACADO15069 1562 aa27.65■■■□□ 2.02
CDIP1-203ENST00000562579 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
CDIP1-203ENST00000562579 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
CDIP1-203ENST00000562579 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
CDIP1-203ENST00000562579 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
CDIP1-203ENST00000562579 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
CDIP1-203ENST00000562579 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
CDIP1-203ENST00000562579 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
CDIP1-203ENST00000562579 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
CDIP1-203ENST00000562579 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
CDIP1-203ENST00000562579 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
CDIP1-203ENST00000562579 MROH2BQ7Z745 1585 aa25.76■■□□□ 1.71
CDIP1-203ENST00000562579 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
CDIP1-203ENST00000562579 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
CDIP1-203ENST00000562579 RSF1Q96T23 1441 aaPredicted RBP25.66■■□□□ 1.7
CDIP1-203ENST00000562579 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
CDIP1-203ENST00000562579 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
CDIP1-203ENST00000562579 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
CDIP1-203ENST00000562579 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
CDIP1-203ENST00000562579 WIZO95785 1651 aa25.45■■□□□ 1.67
CDIP1-203ENST00000562579 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
CDIP1-203ENST00000562579 BAZ1BQ9UIG0 1483 aaKnown RBP25.39■■□□□ 1.65
CDIP1-203ENST00000562579 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
CDIP1-203ENST00000562579 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
CDIP1-203ENST00000562579 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
CDIP1-203ENST00000562579 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
CDIP1-203ENST00000562579 CFTRP13569 1480 aa24.76■■□□□ 1.55
CDIP1-203ENST00000562579 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
CDIP1-203ENST00000562579 NESP48681 1621 aa24.72■■□□□ 1.55
CDIP1-203ENST00000562579 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
CDIP1-203ENST00000562579 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
CDIP1-203ENST00000562579 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
CDIP1-203ENST00000562579 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
CDIP1-203ENST00000562579 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
CDIP1-203ENST00000562579 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
CDIP1-203ENST00000562579 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
CDIP1-203ENST00000562579 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
CDIP1-203ENST00000562579 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
CDIP1-203ENST00000562579 ABCC8Q09428 1581 aa24.2■■□□□ 1.46
CDIP1-203ENST00000562579 WDR62O43379 1518 aa24.19■■□□□ 1.46
CDIP1-203ENST00000562579 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
CDIP1-203ENST00000562579 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
CDIP1-203ENST00000562579 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
CDIP1-203ENST00000562579 CUX1P39880 1505 aa24.14■■□□□ 1.45
CDIP1-203ENST00000562579 CUX2O14529 1486 aa24.07■■□□□ 1.44
CDIP1-203ENST00000562579 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
CDIP1-203ENST00000562579 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
CDIP1-203ENST00000562579 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
CDIP1-203ENST00000562579 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
CDIP1-203ENST00000562579 FGD5Q6ZNL6 1462 aa23.98■■□□□ 1.43
CDIP1-203ENST00000562579 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
CDIP1-203ENST00000562579 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CDIP1-203ENST00000562579 SOGA1O94964 1423 aa23.91■■□□□ 1.42
CDIP1-203ENST00000562579 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
CDIP1-203ENST00000562579 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
CDIP1-203ENST00000562579 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
CDIP1-203ENST00000562579 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
CDIP1-203ENST00000562579 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
CDIP1-203ENST00000562579 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
CDIP1-203ENST00000562579 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
CDIP1-203ENST00000562579 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
CDIP1-203ENST00000562579 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
CDIP1-203ENST00000562579 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
CDIP1-203ENST00000562579 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
CDIP1-203ENST00000562579 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
CDIP1-203ENST00000562579 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
CDIP1-203ENST00000562579 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
CDIP1-203ENST00000562579 IGF1RP08069 1367 aa23.52■■□□□ 1.36
CDIP1-203ENST00000562579 EEA1Q15075 1411 aa23.51■■□□□ 1.35
CDIP1-203ENST00000562579 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
CDIP1-203ENST00000562579 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
CDIP1-203ENST00000562579 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
CDIP1-203ENST00000562579 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
CDIP1-203ENST00000562579 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
CDIP1-203ENST00000562579 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
CDIP1-203ENST00000562579 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
CDIP1-203ENST00000562579 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
CDIP1-203ENST00000562579 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
CDIP1-203ENST00000562579 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
CDIP1-203ENST00000562579 CUL7Q14999 1698 aa23.34■■□□□ 1.33
CDIP1-203ENST00000562579 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
CDIP1-203ENST00000562579 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
CDIP1-203ENST00000562579 FBLN2P98095 1184 aa23.28■■□□□ 1.32
CDIP1-203ENST00000562579 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
CDIP1-203ENST00000562579 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
CDIP1-203ENST00000562579 CHD1O14646 1710 aa23.19■■□□□ 1.3
CDIP1-203ENST00000562579 OSCARQ8IYS5 282 aa23.17■■□□□ 1.3
CDIP1-203ENST00000562579 KIF21BO75037 1637 aa23.17■■□□□ 1.3
CDIP1-203ENST00000562579 NUP160Q12769 1436 aa23.16■■□□□ 1.3
CDIP1-203ENST00000562579 GOLGA3Q08378 1498 aa23.1■■□□□ 1.29
CDIP1-203ENST00000562579 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
CDIP1-203ENST00000562579 KIAA0586Q9BVV6 1533 aa23.05■■□□□ 1.28
CDIP1-203ENST00000562579 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms