Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 PBX2P1-201ENST00000493219 1291 ntBASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM62Q9BVG3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 AC024257.2-201ENST00000549699 147 ntBASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 DUSP8P5-201ENST00000422884 1815 ntBASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM62Q9BVG3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM62Q9BVG3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 EDA-201ENST00000338901 1233 ntBASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM62Q9BVG3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM62Q9BVG3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 MIR4767-201ENST00000582827 78 ntBASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.15■■□□□ 1.3
TRIM62Q9BVG3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.14■■□□□ 1.3
TRIM62Q9BVG3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 OR2I1P-207ENST00000453522 948 ntBASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM62Q9BVG3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIM62Q9BVG3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM62Q9BVG3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM62Q9BVG3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM62Q9BVG3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM62Q9BVG3 AL355001.2-201ENST00000620617 1191 ntBASIC23.12■■□□□ 1.29
TRIM62Q9BVG3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM62Q9BVG3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms