Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL23A1Q86Y22 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL23A1Q86Y22 AC142086.2-201ENST00000569753 217 ntBASIC28.39■■■□□ 2.14
COL23A1Q86Y22 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.39■■■□□ 2.14
COL23A1Q86Y22 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
COL23A1Q86Y22 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
COL23A1Q86Y22 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
COL23A1Q86Y22 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.39■■■□□ 2.13
COL23A1Q86Y22 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
COL23A1Q86Y22 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL23A1Q86Y22 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL23A1Q86Y22 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL23A1Q86Y22 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.38■■■□□ 2.13
COL23A1Q86Y22 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 HLA-L-211ENST00000482052 1765 ntBASIC28.37■■■□□ 2.13
COL23A1Q86Y22 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COL23A1Q86Y22 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL23A1Q86Y22 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
COL23A1Q86Y22 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL23A1Q86Y22 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL23A1Q86Y22 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL23A1Q86Y22 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
COL23A1Q86Y22 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 KRT19P1-201ENST00000405746 1186 ntBASIC28.35■■■□□ 2.13
COL23A1Q86Y22 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.35■■■□□ 2.13
COL23A1Q86Y22 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.34■■■□□ 2.13
COL23A1Q86Y22 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
COL23A1Q86Y22 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.33■■■□□ 2.12
COL23A1Q86Y22 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.32■■■□□ 2.12
COL23A1Q86Y22 KRT18P6-201ENST00000555540 1265 ntBASIC28.31■■■□□ 2.12
COL23A1Q86Y22 FP325331.1-202ENST00000623531 1380 ntBASIC28.31■■■□□ 2.12
COL23A1Q86Y22 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.31■■■□□ 2.12
COL23A1Q86Y22 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL23A1Q86Y22 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.31■■■□□ 2.12
COL23A1Q86Y22 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL23A1Q86Y22 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
COL23A1Q86Y22 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.3■■■□□ 2.12
COL23A1Q86Y22 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL23A1Q86Y22 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.3■■■□□ 2.12
COL23A1Q86Y22 AL050303.2-201ENST00000619798 666 ntBASIC28.3■■■□□ 2.12
COL23A1Q86Y22 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
COL23A1Q86Y22 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
COL23A1Q86Y22 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.29■■■□□ 2.12
COL23A1Q86Y22 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL23A1Q86Y22 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
COL23A1Q86Y22 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL23A1Q86Y22 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL23A1Q86Y22 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL23A1Q86Y22 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.28■■■□□ 2.12
COL23A1Q86Y22 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC28.28■■■□□ 2.12
COL23A1Q86Y22 MIR4651-201ENST00000582622 73 ntBASIC28.28■■■□□ 2.12
COL23A1Q86Y22 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.28■■■□□ 2.12
COL23A1Q86Y22 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
COL23A1Q86Y22 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms