Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB1AP62820 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB1AP62820 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB1AP62820 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAB1AP62820 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB1AP62820 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB1AP62820 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RAB1AP62820 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB1AP62820 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB1AP62820 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB1AP62820 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB1AP62820 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RAB1AP62820 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAB1AP62820 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB1AP62820 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB1AP62820 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB1AP62820 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.47■□□□□ 0.71
RAB1AP62820 AC009086.3-201ENST00000623486 1008 ntBASIC19.47■□□□□ 0.71
RAB1AP62820 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RAB1AP62820 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB1AP62820 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.47■□□□□ 0.71
RAB1AP62820 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB1AP62820 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
RAB1AP62820 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB1AP62820 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB1AP62820 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RAB1AP62820 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB1AP62820 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB1AP62820 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
RAB1AP62820 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB1AP62820 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB1AP62820 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB1AP62820 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB1AP62820 DUSP8P5-201ENST00000422884 1815 ntBASIC19.46■□□□□ 0.71
RAB1AP62820 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB1AP62820 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB1AP62820 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB1AP62820 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB1AP62820 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB1AP62820 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB1AP62820 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB1AP62820 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.45■□□□□ 0.7
RAB1AP62820 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB1AP62820 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB1AP62820 DUX4L19-201ENST00000557448 1267 ntBASIC19.45■□□□□ 0.7
RAB1AP62820 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RAB1AP62820 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB1AP62820 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RAB1AP62820 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB1AP62820 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB1AP62820 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB1AP62820 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB1AP62820 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB1AP62820 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB1AP62820 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB1AP62820 AC068473.5-201ENST00000616428 2072 ntBASIC19.44■□□□□ 0.7
RAB1AP62820 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB1AP62820 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB1AP62820 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB1AP62820 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB1AP62820 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB1AP62820 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAB1AP62820 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB1AP62820 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB1AP62820 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 DUSP8P3-201ENST00000399571 1760 ntBASIC19.43■□□□□ 0.7
RAB1AP62820 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 AC006455.2-201ENST00000429931 906 ntBASIC19.43■□□□□ 0.7
RAB1AP62820 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB1AP62820 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.43■□□□□ 0.7
RAB1AP62820 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB1AP62820 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB1AP62820 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB1AP62820 SYT6-210ENST00000641643 1587 ntBASIC19.43■□□□□ 0.7
RAB1AP62820 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
RAB1AP62820 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.43■□□□□ 0.7
RAB1AP62820 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB1AP62820 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB1AP62820 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB1AP62820 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB1AP62820 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB1AP62820 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB1AP62820 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB1AP62820 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB1AP62820 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB1AP62820 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB1AP62820 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB1AP62820 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms