Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 LINC00526-201ENST00000581067 1875 ntBASIC19.9■□□□□ 0.78
SDHAP31040 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.9■□□□□ 0.78
SDHAP31040 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.9■□□□□ 0.78
SDHAP31040 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.9■□□□□ 0.78
SDHAP31040 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SDHAP31040 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SDHAP31040 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SDHAP31040 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SDHAP31040 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SDHAP31040 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SDHAP31040 AC242852.2-201ENST00000615738 1807 ntBASIC19.89■□□□□ 0.77
SDHAP31040 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SDHAP31040 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SDHAP31040 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.88■□□□□ 0.77
SDHAP31040 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.88■□□□□ 0.77
SDHAP31040 MTDHP2-201ENST00000601468 714 ntBASIC19.88■□□□□ 0.77
SDHAP31040 MIR4787-201ENST00000607364 84 ntBASIC19.88■□□□□ 0.77
SDHAP31040 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.88■□□□□ 0.77
SDHAP31040 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDHAP31040 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.87■□□□□ 0.77
SDHAP31040 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
SDHAP31040 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SDHAP31040 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAP31040 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAP31040 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAP31040 RARRES2P1-201ENST00000474487 481 ntBASIC19.87■□□□□ 0.77
SDHAP31040 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAP31040 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SDHAP31040 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.87■□□□□ 0.77
SDHAP31040 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDHAP31040 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
SDHAP31040 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
SDHAP31040 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.86■□□□□ 0.77
SDHAP31040 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SDHAP31040 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SDHAP31040 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDHAP31040 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SDHAP31040 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SDHAP31040 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SDHAP31040 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SDHAP31040 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.85■□□□□ 0.77
SDHAP31040 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SDHAP31040 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.85■□□□□ 0.77
SDHAP31040 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SDHAP31040 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDHAP31040 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDHAP31040 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SDHAP31040 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.84■□□□□ 0.77
SDHAP31040 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
SDHAP31040 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
SDHAP31040 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SDHAP31040 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SDHAP31040 CLDN5-201ENST00000403084 2357 ntBASIC19.83■□□□□ 0.77
SDHAP31040 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.83■□□□□ 0.77
SDHAP31040 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.83■□□□□ 0.77
SDHAP31040 AC239859.2-201ENST00000444165 318 ntBASIC19.83■□□□□ 0.77
SDHAP31040 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SDHAP31040 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.83■□□□□ 0.77
SDHAP31040 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SDHAP31040 DUX4L4-201ENST00000566884 1269 ntBASIC19.83■□□□□ 0.77
SDHAP31040 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms