Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.86■□□□□ 0.61
SHOXO15266 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.85■□□□□ 0.61
SHOXO15266 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SHOXO15266 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
SHOXO15266 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SHOXO15266 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHOXO15266 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
SHOXO15266 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SHOXO15266 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.84■□□□□ 0.61
SHOXO15266 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SHOXO15266 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.84■□□□□ 0.61
SHOXO15266 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SHOXO15266 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.84■□□□□ 0.61
SHOXO15266 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.84■□□□□ 0.61
SHOXO15266 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SHOXO15266 DUX4L9-201ENST00000449051 1259 ntBASIC18.84■□□□□ 0.61
SHOXO15266 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.84■□□□□ 0.61
SHOXO15266 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHOXO15266 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHOXO15266 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SHOXO15266 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHOXO15266 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHOXO15266 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHOXO15266 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHOXO15266 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SHOXO15266 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.83■□□□□ 0.61
SHOXO15266 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.83■□□□□ 0.6
SHOXO15266 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.83■□□□□ 0.6
SHOXO15266 U85056.1-201ENST00000616429 682 ntBASIC18.83■□□□□ 0.6
SHOXO15266 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHOXO15266 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SHOXO15266 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHOXO15266 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHOXO15266 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SHOXO15266 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHOXO15266 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.82■□□□□ 0.6
SHOXO15266 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHOXO15266 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHOXO15266 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.82■□□□□ 0.6
SHOXO15266 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHOXO15266 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHOXO15266 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHOXO15266 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.82■□□□□ 0.6
SHOXO15266 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHOXO15266 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
SHOXO15266 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.82■□□□□ 0.6
SHOXO15266 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SHOXO15266 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHOXO15266 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHOXO15266 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHOXO15266 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHOXO15266 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SHOXO15266 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHOXO15266 AC087393.1-201ENST00000582896 145 ntBASIC18.81■□□□□ 0.6
SHOXO15266 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHOXO15266 HLA-L-211ENST00000482052 1765 ntBASIC18.81■□□□□ 0.6
SHOXO15266 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.8■□□□□ 0.6
SHOXO15266 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHOXO15266 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.8■□□□□ 0.6
SHOXO15266 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.8■□□□□ 0.6
SHOXO15266 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.8■□□□□ 0.6
SHOXO15266 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHOXO15266 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.8■□□□□ 0.6
SHOXO15266 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHOXO15266 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHOXO15266 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHOXO15266 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHOXO15266 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 AC129492.7-201ENST00000622992 756 ntBASIC18.79■□□□□ 0.6
SHOXO15266 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHOXO15266 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SHOXO15266 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.79■□□□□ 0.6
SHOXO15266 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHOXO15266 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.79■□□□□ 0.6
SHOXO15266 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHOXO15266 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms