Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.83■□□□□ 0.44
UPK2O00526 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK2O00526 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.83■□□□□ 0.44
UPK2O00526 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UPK2O00526 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK2O00526 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK2O00526 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
UPK2O00526 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK2O00526 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK2O00526 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPK2O00526 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.82■□□□□ 0.44
UPK2O00526 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK2O00526 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK2O00526 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.82■□□□□ 0.44
UPK2O00526 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.82■□□□□ 0.44
UPK2O00526 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.82■□□□□ 0.44
UPK2O00526 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK2O00526 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 FP325331.1-202ENST00000623531 1380 ntBASIC17.81■□□□□ 0.44
UPK2O00526 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.81■□□□□ 0.44
UPK2O00526 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK2O00526 LINC01529-204ENST00000636474 1715 ntBASIC17.81■□□□□ 0.44
UPK2O00526 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UPK2O00526 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UPK2O00526 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UPK2O00526 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
UPK2O00526 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UPK2O00526 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.8■□□□□ 0.44
UPK2O00526 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.8■□□□□ 0.44
UPK2O00526 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UPK2O00526 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
UPK2O00526 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.8■□□□□ 0.44
UPK2O00526 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.8■□□□□ 0.44
UPK2O00526 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
UPK2O00526 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK2O00526 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UPK2O00526 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
UPK2O00526 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK2O00526 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPK2O00526 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK2O00526 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK2O00526 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPK2O00526 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK2O00526 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.79■□□□□ 0.44
UPK2O00526 LINC00565-201ENST00000562710 2331 ntBASIC17.79■□□□□ 0.44
UPK2O00526 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK2O00526 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK2O00526 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
UPK2O00526 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK2O00526 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK2O00526 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPK2O00526 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.78■□□□□ 0.44
UPK2O00526 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.78■□□□□ 0.44
UPK2O00526 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPK2O00526 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UPK2O00526 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK2O00526 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UPK2O00526 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.78■□□□□ 0.44
UPK2O00526 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.78■□□□□ 0.44
UPK2O00526 AC092028.1-203ENST00000608262 953 ntBASIC17.78■□□□□ 0.44
UPK2O00526 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPK2O00526 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPK2O00526 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UPK2O00526 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
UPK2O00526 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK2O00526 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK2O00526 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UPK2O00526 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.77■□□□□ 0.44
UPK2O00526 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
UPK2O00526 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.77■□□□□ 0.44
UPK2O00526 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK2O00526 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPK2O00526 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK2O00526 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK2O00526 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK2O00526 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UPK2O00526 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms