Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
TRIM6-TRIM34B2RNG4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
TRIM6-TRIM34B2RNG4 MIR3621-201ENST00000580529 85 ntBASIC27.14■■□□□ 1.94
TRIM6-TRIM34B2RNG4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.14■■□□□ 1.94
TRIM6-TRIM34B2RNG4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM6-TRIM34B2RNG4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.14■■□□□ 1.94
TRIM6-TRIM34B2RNG4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC27.14■■□□□ 1.93
TRIM6-TRIM34B2RNG4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM6-TRIM34B2RNG4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.12■■□□□ 1.93
TRIM6-TRIM34B2RNG4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM6-TRIM34B2RNG4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 DUX4L4-201ENST00000566884 1269 ntBASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM6-TRIM34B2RNG4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM6-TRIM34B2RNG4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM6-TRIM34B2RNG4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.08■■□□□ 1.93
TRIM6-TRIM34B2RNG4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM6-TRIM34B2RNG4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM6-TRIM34B2RNG4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.08■■□□□ 1.93
TRIM6-TRIM34B2RNG4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.08■■□□□ 1.93
TRIM6-TRIM34B2RNG4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
TRIM6-TRIM34B2RNG4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM6-TRIM34B2RNG4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM6-TRIM34B2RNG4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM6-TRIM34B2RNG4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM6-TRIM34B2RNG4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM6-TRIM34B2RNG4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.07■■□□□ 1.92
TRIM6-TRIM34B2RNG4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.06■■□□□ 1.92
TRIM6-TRIM34B2RNG4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 AC233723.2-201ENST00000623798 2106 ntBASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
TRIM6-TRIM34B2RNG4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM6-TRIM34B2RNG4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TRIM6-TRIM34B2RNG4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
TRIM6-TRIM34B2RNG4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms