Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.82□□□□□ -0.04
CASP4P49662 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 AC103563.1-201ENST00000429316 123 ntBASIC14.82□□□□□ -0.04
CASP4P49662 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.82□□□□□ -0.04
CASP4P49662 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.82□□□□□ -0.04
CASP4P49662 MIR3147-201ENST00000577811 66 ntBASIC14.82□□□□□ -0.04
CASP4P49662 RN7SL470P-201ENST00000583069 259 ntBASIC14.82□□□□□ -0.04
CASP4P49662 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.82□□□□□ -0.04
CASP4P49662 AC026120.2-201ENST00000617239 309 ntBASIC14.82□□□□□ -0.04
CASP4P49662 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 AL118506.1-201ENST00000601296 3082 ntBASIC14.81□□□□□ -0.04
CASP4P49662 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 TNRC18P1-201ENST00000502875 3650 ntBASIC14.81□□□□□ -0.04
CASP4P49662 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP4P49662 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP4P49662 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 MIR33B-201ENST00000385104 96 ntBASIC14.81□□□□□ -0.04
CASP4P49662 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP4P49662 ACTBP14-201ENST00000411655 1089 ntBASIC14.81□□□□□ -0.04
CASP4P49662 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP4P49662 KRT18P62-201ENST00000446618 1287 ntBASIC14.81□□□□□ -0.04
CASP4P49662 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 AC006529.1-201ENST00000459978 637 ntBASIC14.81□□□□□ -0.04
CASP4P49662 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CASP4P49662 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.81□□□□□ -0.04
CASP4P49662 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.81□□□□□ -0.04
CASP4P49662 NUDT4P2-201ENST00000578341 546 ntBASIC14.81□□□□□ -0.04
CASP4P49662 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
CASP4P49662 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC14.81□□□□□ -0.04
CASP4P49662 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.81□□□□□ -0.04
CASP4P49662 AC091807.1-201ENST00000418838 1544 ntBASIC14.81□□□□□ -0.04
CASP4P49662 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CASP4P49662 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CASP4P49662 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CASP4P49662 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms