Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 RNA5SP491-201ENST00000362936 118 ntBASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 SNORD23-201ENST00000408876 110 ntBASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 KRT17P4-201ENST00000429445 819 ntBASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMG20BQ9P0W2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
HMG20BQ9P0W2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 FKBP4P8-201ENST00000610931 1369 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AC008040.5-201ENST00000599781 1781 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 PI4KAP2-201ENST00000360806 2080 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 PGK1P2-201ENST00000431702 1214 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AC092862.1-201ENST00000541534 533 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AC137723.2-201ENST00000623540 398 ntBASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.51■□□□□ 0.23
HMG20BQ9P0W2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 GEMIN8P4-201ENST00000380526 729 ntBASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 ALG1L7P-201ENST00000502317 768 ntBASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 FAM86B3P-203ENST00000523992 854 ntBASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 AP000769.1-203ENST00000637245 208 ntBASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMG20BQ9P0W2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.49■□□□□ 0.23
HMG20BQ9P0W2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms