Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 BRD7P5-201ENST00000299197 1822 ntBASIC10.48□□□□□ -0.73
VGLL1Q99990 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
VGLL1Q99990 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
VGLL1Q99990 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VGLL1Q99990 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC008040.5-201ENST00000599781 1781 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 C2-209ENST00000452323 1999 ntTSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AL357140.3-201ENST00000639753 1983 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC10.47□□□□□ -0.73
VGLL1Q99990 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 HLA-J-204ENST00000495278 958 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC10.47□□□□□ -0.73
VGLL1Q99990 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC10.47□□□□□ -0.73
VGLL1Q99990 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.47□□□□□ -0.73
VGLL1Q99990 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC005324.6-201ENST00000587972 613 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 AL356740.1-201ENST00000602192 1297 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AP000346.4-201ENST00000614827 381 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
VGLL1Q99990 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC10.47□□□□□ -0.73
VGLL1Q99990 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC015819.3-201ENST00000624305 2674 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms