RNA–Protein interactions for RNA: ENST00000542629.5

PPFIBP1-215, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-215ENST00000542629 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
PPFIBP1-215ENST00000542629 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
PPFIBP1-215ENST00000542629 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
PPFIBP1-215ENST00000542629 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
PPFIBP1-215ENST00000542629 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
PPFIBP1-215ENST00000542629 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
PPFIBP1-215ENST00000542629 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
PPFIBP1-215ENST00000542629 ABCC9O60706 1549 aa22.9■■□□□ 1.26
PPFIBP1-215ENST00000542629 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
PPFIBP1-215ENST00000542629 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
PPFIBP1-215ENST00000542629 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
PPFIBP1-215ENST00000542629 NACADO15069 1562 aa22.36■■□□□ 1.17
PPFIBP1-215ENST00000542629 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
PPFIBP1-215ENST00000542629 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
PPFIBP1-215ENST00000542629 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
PPFIBP1-215ENST00000542629 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
PPFIBP1-215ENST00000542629 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
PPFIBP1-215ENST00000542629 FAM9AQ8IZU1 332 aaPredicted RBP22.06■■□□□ 1.12
PPFIBP1-215ENST00000542629 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
PPFIBP1-215ENST00000542629 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
PPFIBP1-215ENST00000542629 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
PPFIBP1-215ENST00000542629 PCGF6Q9BYE7 350 aa21.94■■□□□ 1.1
PPFIBP1-215ENST00000542629 WIZO95785 1651 aa21.89■■□□□ 1.09
PPFIBP1-215ENST00000542629 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
PPFIBP1-215ENST00000542629 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
PPFIBP1-215ENST00000542629 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
PPFIBP1-215ENST00000542629 HRCP23327 699 aa21.54■■□□□ 1.04
PPFIBP1-215ENST00000542629 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
PPFIBP1-215ENST00000542629 BICRAQ9NZM4 1560 aa21.46■■□□□ 1.03
PPFIBP1-215ENST00000542629 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
PPFIBP1-215ENST00000542629 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
PPFIBP1-215ENST00000542629 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
PPFIBP1-215ENST00000542629 ABCC8Q09428 1581 aa21.39■■□□□ 1.02
PPFIBP1-215ENST00000542629 SMARCA2P51531 1590 aa21.35■■□□□ 1.01
PPFIBP1-215ENST00000542629 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
PPFIBP1-215ENST00000542629 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
PPFIBP1-215ENST00000542629 SOGA1O94964 1423 aa21.17■□□□□ 0.98
PPFIBP1-215ENST00000542629 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
PPFIBP1-215ENST00000542629 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
PPFIBP1-215ENST00000542629 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
PPFIBP1-215ENST00000542629 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.96
PPFIBP1-215ENST00000542629 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
PPFIBP1-215ENST00000542629 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
PPFIBP1-215ENST00000542629 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
PPFIBP1-215ENST00000542629 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
PPFIBP1-215ENST00000542629 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
PPFIBP1-215ENST00000542629 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
PPFIBP1-215ENST00000542629 EEA1Q15075 1411 aa20.85■□□□□ 0.93
PPFIBP1-215ENST00000542629 TNIKQ9UKE5 1360 aa20.83■□□□□ 0.92
PPFIBP1-215ENST00000542629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.79■□□□□ 0.92
PPFIBP1-215ENST00000542629 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
PPFIBP1-215ENST00000542629 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
PPFIBP1-215ENST00000542629 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
PPFIBP1-215ENST00000542629 CCER1Q8TC90 406 aaPredicted RBP20.72■□□□□ 0.91
PPFIBP1-215ENST00000542629 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
PPFIBP1-215ENST00000542629 HMGXB3Q12766 1538 aa20.64■□□□□ 0.89
PPFIBP1-215ENST00000542629 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
PPFIBP1-215ENST00000542629 CLIP1P30622 1438 aa20.62■□□□□ 0.89
PPFIBP1-215ENST00000542629 APLP2Q06481 763 aa20.61■□□□□ 0.89
PPFIBP1-215ENST00000542629 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
PPFIBP1-215ENST00000542629 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
PPFIBP1-215ENST00000542629 CFTRP13569 1480 aa20.52■□□□□ 0.88
PPFIBP1-215ENST00000542629 CUX1P39880 1505 aa20.51■□□□□ 0.87
PPFIBP1-215ENST00000542629 KIF21BO75037 1637 aa20.5■□□□□ 0.87
PPFIBP1-215ENST00000542629 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
PPFIBP1-215ENST00000542629 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
PPFIBP1-215ENST00000542629 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
PPFIBP1-215ENST00000542629 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
PPFIBP1-215ENST00000542629 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
PPFIBP1-215ENST00000542629 CUX2O14529 1486 aa20.36■□□□□ 0.85
PPFIBP1-215ENST00000542629 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
PPFIBP1-215ENST00000542629 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.83
PPFIBP1-215ENST00000542629 NESP48681 1621 aa20.27■□□□□ 0.83
PPFIBP1-215ENST00000542629 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
PPFIBP1-215ENST00000542629 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
PPFIBP1-215ENST00000542629 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
PPFIBP1-215ENST00000542629 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
PPFIBP1-215ENST00000542629 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
PPFIBP1-215ENST00000542629 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
PPFIBP1-215ENST00000542629 IGF1RP08069 1367 aa20.23■□□□□ 0.83
PPFIBP1-215ENST00000542629 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
PPFIBP1-215ENST00000542629 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
PPFIBP1-215ENST00000542629 ITGAEP38570 1179 aa20.19■□□□□ 0.82
PPFIBP1-215ENST00000542629 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
PPFIBP1-215ENST00000542629 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
PPFIBP1-215ENST00000542629 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
PPFIBP1-215ENST00000542629 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
PPFIBP1-215ENST00000542629 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
PPFIBP1-215ENST00000542629 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
PPFIBP1-215ENST00000542629 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
PPFIBP1-215ENST00000542629 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
PPFIBP1-215ENST00000542629 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
PPFIBP1-215ENST00000542629 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
PPFIBP1-215ENST00000542629 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
PPFIBP1-215ENST00000542629 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
PPFIBP1-215ENST00000542629 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
PPFIBP1-215ENST00000542629 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
PPFIBP1-215ENST00000542629 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
PPFIBP1-215ENST00000542629 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
PPFIBP1-215ENST00000542629 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms