Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM1Q2M3G4 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CA6-205ENST00000480186 1493 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 LILRP2-202ENST00000413572 1383 ntBASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 SDCBP2P1-201ENST00000416115 614 ntBASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CDK4P1-201ENST00000454213 828 ntBASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 RPSAP70-201ENST00000504462 864 ntBASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 FBXO36P1-201ENST00000579006 471 ntBASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM1Q2M3G4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 NCLP1-201ENST00000445357 1963 ntBASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 CFL1P6-201ENST00000400899 494 ntBASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC15.78■□□□□ 0.12
SHROOM1Q2M3G4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 MKRN7P-201ENST00000433469 1371 ntBASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AC034205.3-201ENST00000603595 1376 ntBASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SHROOM1Q2M3G4 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms