Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LINC00474Q9P2X8 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AC012617.1-204ENST00000586340 2305 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 RNA5SP359-201ENST00000364838 113 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ELK2AP-201ENST00000392510 1007 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AC007274.1-201ENST00000439805 662 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 RN7SL11P-201ENST00000471305 293 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 RN7SL277P-201ENST00000481521 288 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 BAP1-211ENST00000615113 489 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 MIR6769A-201ENST00000617340 73 ntBASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC00474Q9P2X8 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.96
LINC00474Q9P2X8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC9.09□□□□□ -0.96
LINC00474Q9P2X8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms