Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AL390755.1-201ENST00000623716 2027 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AL139158.3-201ENST00000641212 1562 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 PHBP3-201ENST00000412562 819 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AP001331.1-201ENST00000413008 1015 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AP001979.1-201ENST00000529222 751 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 GOLGA2P10-201ENST00000550961 817 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AL353708.1-201ENST00000567904 1257 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AL133551.1-201ENST00000610279 1222 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC007274.3-201ENST00000619838 385 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 MIR941-1-201ENST00000636396 72 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC018442.1-201ENST00000421439 2061 ntBASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO4Q2I0M5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AL590824.1-201ENST00000403828 1349 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AC011477.7-201ENST00000617163 1440 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms