Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 GUCY2EP-203ENST00000531117 1918 ntBASIC11.84□□□□□ -0.51
CD40P25942 AC073869.1-201ENST00000415574 2762 ntBASIC11.84□□□□□ -0.51
CD40P25942 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.84□□□□□ -0.51
CD40P25942 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD40P25942 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.51
CD40P25942 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CD40P25942 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
CD40P25942 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.83□□□□□ -0.51
CD40P25942 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CD40P25942 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CD40P25942 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD40P25942 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CD40P25942 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC11.83□□□□□ -0.52
CD40P25942 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CD40P25942 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.83□□□□□ -0.52
CD40P25942 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CD40P25942 U3.5-201ENST00000363448 216 ntBASIC11.83□□□□□ -0.52
CD40P25942 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CD40P25942 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC11.83□□□□□ -0.52
CD40P25942 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC11.83□□□□□ -0.52
CD40P25942 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC11.83□□□□□ -0.52
CD40P25942 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC11.83□□□□□ -0.52
CD40P25942 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC11.83□□□□□ -0.52
CD40P25942 ALG1L3P-201ENST00000503331 765 ntBASIC11.83□□□□□ -0.52
CD40P25942 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC11.83□□□□□ -0.52
CD40P25942 AC026120.2-201ENST00000617239 309 ntBASIC11.83□□□□□ -0.52
CD40P25942 AC073869.4-201ENST00000620841 800 ntBASIC11.83□□□□□ -0.52
CD40P25942 AC138466.4-201ENST00000623965 852 ntBASIC11.83□□□□□ -0.52
CD40P25942 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.83□□□□□ -0.52
CD40P25942 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.83□□□□□ -0.52
CD40P25942 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CD40P25942 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 AC072061.1-201ENST00000569710 2234 ntBASIC11.83□□□□□ -0.52
CD40P25942 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC11.83□□□□□ -0.52
CD40P25942 AL359881.3-201ENST00000602640 1721 ntBASIC11.83□□□□□ -0.52
CD40P25942 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD40P25942 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC11.82□□□□□ -0.52
CD40P25942 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CD40P25942 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 KRT8P42-201ENST00000405771 1399 ntBASIC11.82□□□□□ -0.52
CD40P25942 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD40P25942 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.82□□□□□ -0.52
CD40P25942 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CD40P25942 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.82□□□□□ -0.52
CD40P25942 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC11.82□□□□□ -0.52
CD40P25942 RHOC-205ENST00000369636 786 ntTSL 2 BASIC11.82□□□□□ -0.52
CD40P25942 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD40P25942 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD40P25942 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC11.82□□□□□ -0.52
CD40P25942 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC11.82□□□□□ -0.52
CD40P25942 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.82□□□□□ -0.52
CD40P25942 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC11.82□□□□□ -0.52
CD40P25942 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC11.82□□□□□ -0.52
CD40P25942 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms