Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC8.71□□□□□ -1.02
PCP4P48539 AC006064.1-201ENST00000499202 560 ntTSL 4 BASIC8.71□□□□□ -1.02
PCP4P48539 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC8.71□□□□□ -1.02
PCP4P48539 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC8.71□□□□□ -1.02
PCP4P48539 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 JAM2-201ENST00000312957 4209 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PCP4P48539 TCF19-202ENST00000376257 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC8.71□□□□□ -1.02
PCP4P48539 AC079777.1-201ENST00000623836 1953 ntBASIC8.71□□□□□ -1.02
PCP4P48539 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 AP000911.1-203ENST00000529070 1673 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 C14orf93-201ENST00000299088 3354 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PCP4P48539 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCP4P48539 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC8.71□□□□□ -1.02
PCP4P48539 MICAL3-204ENST00000414725 4756 ntTSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 PDIA3P1-201ENST00000471856 1510 ntBASIC8.7□□□□□ -1.02
PCP4P48539 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
PCP4P48539 MASTL-202ENST00000375940 3080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC8.7□□□□□ -1.02
PCP4P48539 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 AC092368.3-202ENST00000574180 1591 ntBASIC8.7□□□□□ -1.02
PCP4P48539 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 LINC01588-204ENST00000530176 2444 ntTSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 ARFGAP3-203ENST00000437119 1650 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 NARF-206ENST00000457415 1668 ntTSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC8.7□□□□□ -1.02
PCP4P48539 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC8.7□□□□□ -1.02
PCP4P48539 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PCP4P48539 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC8.7□□□□□ -1.02
PCP4P48539 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC8.7□□□□□ -1.02
PCP4P48539 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 MIR4697HG-201ENST00000624667 5164 ntBASIC8.7□□□□□ -1.02
PCP4P48539 OPRM1-202ENST00000330432 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 AC138951.1-201ENST00000502532 2685 ntBASIC8.7□□□□□ -1.02
PCP4P48539 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 ZNF827-208ENST00000513320 3165 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 CYTIP-201ENST00000264192 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PCP4P48539 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 DPP6-201ENST00000332007 3768 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 ITGA6-203ENST00000409532 3544 ntTSL 2 BASIC8.7□□□□□ -1.02
PCP4P48539 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 CD3E-201ENST00000361763 1548 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC8.7□□□□□ -1.02
PCP4P48539 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCP4P48539 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PCP4P48539 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC8.69□□□□□ -1.02
PCP4P48539 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PCP4P48539 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 GRIA1-203ENST00000448073 2825 ntTSL 2 BASIC8.69□□□□□ -1.02
PCP4P48539 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC8.69□□□□□ -1.02
PCP4P48539 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.69□□□□□ -1.02
PCP4P48539 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PCP4P48539 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms