RNA–Protein interactions for RNA: ENST00000416283.6

PHTF2-205, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5 BASIC

Gene PHTF2, Length 5,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-205ENST00000416283 NISCHQ9Y2I1 1504 aa17.02■□□□□ 0.32
PHTF2-205ENST00000416283 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
PHTF2-205ENST00000416283 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
PHTF2-205ENST00000416283 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
PHTF2-205ENST00000416283 PCGF6Q9BYE7 350 aa16.35■□□□□ 0.21
PHTF2-205ENST00000416283 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
PHTF2-205ENST00000416283 HRCP23327 699 aa15.94■□□□□ 0.14
PHTF2-205ENST00000416283 PPARGC1BQ86YN6 1023 aaKnown RBP15.91■□□□□ 0.14
PHTF2-205ENST00000416283 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
PHTF2-205ENST00000416283 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
PHTF2-205ENST00000416283 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
PHTF2-205ENST00000416283 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
PHTF2-205ENST00000416283 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
PHTF2-205ENST00000416283 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
PHTF2-205ENST00000416283 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
PHTF2-205ENST00000416283 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
PHTF2-205ENST00000416283 CENPBP07199 599 aaPredicted RBP15.43■□□□□ 0.06
PHTF2-205ENST00000416283 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
PHTF2-205ENST00000416283 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
PHTF2-205ENST00000416283 MYT1Q01538 1121 aa15.14■□□□□ 0.01
PHTF2-205ENST00000416283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
PHTF2-205ENST00000416283 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
PHTF2-205ENST00000416283 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
PHTF2-205ENST00000416283 APLP2Q06481 763 aa15.05■□□□□ 0
PHTF2-205ENST00000416283 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
PHTF2-205ENST00000416283 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
PHTF2-205ENST00000416283 UBTFP17480 764 aaKnown RBP14.95□□□□□ -0.02
PHTF2-205ENST00000416283 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
PHTF2-205ENST00000416283 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
PHTF2-205ENST00000416283 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
PHTF2-205ENST00000416283 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
PHTF2-205ENST00000416283 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
PHTF2-205ENST00000416283 NEFLP07196 543 aa14.68□□□□□ -0.06
PHTF2-205ENST00000416283 ITGAEP38570 1179 aa14.63□□□□□ -0.07
PHTF2-205ENST00000416283 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
PHTF2-205ENST00000416283 BCANQ96GW7 911 aa14.62□□□□□ -0.07
PHTF2-205ENST00000416283 ZNF316A6NFI3 1004 aaPredicted RBP14.58□□□□□ -0.08
PHTF2-205ENST00000416283 ATP1B4Q9UN42 357 aaPredicted RBP14.57□□□□□ -0.08
PHTF2-205ENST00000416283 MIER1Q8N108 512 aa14.41□□□□□ -0.1
PHTF2-205ENST00000416283 CNGB1Q14028 1251 aaPredicted RBP14.38□□□□□ -0.11
PHTF2-205ENST00000416283 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
PHTF2-205ENST00000416283 FKBP8Q14318 412 aa14.23□□□□□ -0.13
PHTF2-205ENST00000416283 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.14
PHTF2-205ENST00000416283 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
PHTF2-205ENST00000416283 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
PHTF2-205ENST00000416283 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
PHTF2-205ENST00000416283 TRIM52Q96A61 297 aa14.1□□□□□ -0.15
PHTF2-205ENST00000416283 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
PHTF2-205ENST00000416283 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
PHTF2-205ENST00000416283 ANP32CO43423 234 aa14.08□□□□□ -0.16
PHTF2-205ENST00000416283 RTL5Q5HYW3 569 aaPredicted RBP14.06□□□□□ -0.16
PHTF2-205ENST00000416283 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
PHTF2-205ENST00000416283 HIRIP3Q9BW71 556 aaPredicted RBP14.04□□□□□ -0.16
PHTF2-205ENST00000416283 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
PHTF2-205ENST00000416283 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
PHTF2-205ENST00000416283 CLSPNQ9HAW4 1339 aa13.96□□□□□ -0.17
PHTF2-205ENST00000416283 BCL11AQ9H165 835 aa13.95□□□□□ -0.18
PHTF2-205ENST00000416283 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
PHTF2-205ENST00000416283 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
PHTF2-205ENST00000416283 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
PHTF2-205ENST00000416283 NBR1Q14596 966 aa13.93□□□□□ -0.18
PHTF2-205ENST00000416283 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
PHTF2-205ENST00000416283 ABCC9O60706 1549 aa13.89□□□□□ -0.19
PHTF2-205ENST00000416283 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
PHTF2-205ENST00000416283 CEP162Q5TB80 1403 aa13.87□□□□□ -0.19
PHTF2-205ENST00000416283 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
PHTF2-205ENST00000416283 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
PHTF2-205ENST00000416283 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
PHTF2-205ENST00000416283 FAM9BQ8IZU0 186 aa13.82□□□□□ -0.2
PHTF2-205ENST00000416283 ZNF326Q5BKZ1 582 aaKnown RBP13.8□□□□□ -0.2
PHTF2-205ENST00000416283 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
PHTF2-205ENST00000416283 EIF5BO60841 1220 aaKnown RBP13.77□□□□□ -0.21
PHTF2-205ENST00000416283 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.21
PHTF2-205ENST00000416283 RBM19Q9Y4C8 960 aaKnown RBP13.77□□□□□ -0.21
PHTF2-205ENST00000416283 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
PHTF2-205ENST00000416283 CLIP1P30622 1438 aa13.73□□□□□ -0.21
PHTF2-205ENST00000416283 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
PHTF2-205ENST00000416283 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
PHTF2-205ENST00000416283 TONSLQ96HA7 1378 aa13.68□□□□□ -0.22
PHTF2-205ENST00000416283 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
PHTF2-205ENST00000416283 TNIKQ9UKE5 1360 aa13.67□□□□□ -0.22
PHTF2-205ENST00000416283 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
PHTF2-205ENST00000416283 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
PHTF2-205ENST00000416283 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
PHTF2-205ENST00000416283 SOGA1O94964 1423 aa13.65□□□□□ -0.22
PHTF2-205ENST00000416283 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
PHTF2-205ENST00000416283 RB1CC1Q8TDY2 1594 aa13.63□□□□□ -0.23
PHTF2-205ENST00000416283 B4GALNT3Q6L9W6 998 aa13.61□□□□□ -0.23
PHTF2-205ENST00000416283 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
PHTF2-205ENST00000416283 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
PHTF2-205ENST00000416283 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
PHTF2-205ENST00000416283 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
PHTF2-205ENST00000416283 DEKP35659 375 aaKnown RBP13.57□□□□□ -0.24
PHTF2-205ENST00000416283 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
PHTF2-205ENST00000416283 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
PHTF2-205ENST00000416283 ARXQ96QS3 562 aa13.51□□□□□ -0.25
PHTF2-205ENST00000416283 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
PHTF2-205ENST00000416283 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
PHTF2-205ENST00000416283 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
PHTF2-205ENST00000416283 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms