RNA–Protein interactions for RNA: ENST00000531044.5

NCAM1-213, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-213ENST00000531044 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
NCAM1-213ENST00000531044 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
NCAM1-213ENST00000531044 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
NCAM1-213ENST00000531044 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
NCAM1-213ENST00000531044 ABCC9O60706 1549 aa16.84■□□□□ 0.29
NCAM1-213ENST00000531044 HRCP23327 699 aa16.78■□□□□ 0.28
NCAM1-213ENST00000531044 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
NCAM1-213ENST00000531044 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
NCAM1-213ENST00000531044 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
NCAM1-213ENST00000531044 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.25
NCAM1-213ENST00000531044 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
NCAM1-213ENST00000531044 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
NCAM1-213ENST00000531044 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
NCAM1-213ENST00000531044 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.18
NCAM1-213ENST00000531044 NACADO15069 1562 aa16.08■□□□□ 0.16
NCAM1-213ENST00000531044 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
NCAM1-213ENST00000531044 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
NCAM1-213ENST00000531044 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
NCAM1-213ENST00000531044 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
NCAM1-213ENST00000531044 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
NCAM1-213ENST00000531044 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
NCAM1-213ENST00000531044 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
NCAM1-213ENST00000531044 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.12
NCAM1-213ENST00000531044 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
NCAM1-213ENST00000531044 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
NCAM1-213ENST00000531044 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
NCAM1-213ENST00000531044 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
NCAM1-213ENST00000531044 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
NCAM1-213ENST00000531044 MYT1Q01538 1121 aa15.51■□□□□ 0.07
NCAM1-213ENST00000531044 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
NCAM1-213ENST00000531044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
NCAM1-213ENST00000531044 NEUROD1Q13562 356 aa15.45■□□□□ 0.06
NCAM1-213ENST00000531044 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
NCAM1-213ENST00000531044 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
NCAM1-213ENST00000531044 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
NCAM1-213ENST00000531044 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
NCAM1-213ENST00000531044 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
NCAM1-213ENST00000531044 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
NCAM1-213ENST00000531044 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
NCAM1-213ENST00000531044 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
NCAM1-213ENST00000531044 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
NCAM1-213ENST00000531044 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
NCAM1-213ENST00000531044 WIZO95785 1651 aa15.19■□□□□ 0.02
NCAM1-213ENST00000531044 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
NCAM1-213ENST00000531044 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
NCAM1-213ENST00000531044 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
NCAM1-213ENST00000531044 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
NCAM1-213ENST00000531044 ABCC8Q09428 1581 aa15.03■□□□□ -0
NCAM1-213ENST00000531044 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
NCAM1-213ENST00000531044 WRNQ14191 1432 aaPredicted RBP eCLIP15.02■□□□□ -0
NCAM1-213ENST00000531044 CEP162Q5TB80 1403 aa15.01□□□□□ -0.01
NCAM1-213ENST00000531044 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
NCAM1-213ENST00000531044 MIER1Q8N108 512 aa14.96□□□□□ -0.02
NCAM1-213ENST00000531044 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
NCAM1-213ENST00000531044 SOGA1O94964 1423 aa14.94□□□□□ -0.02
NCAM1-213ENST00000531044 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
NCAM1-213ENST00000531044 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
NCAM1-213ENST00000531044 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
NCAM1-213ENST00000531044 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
NCAM1-213ENST00000531044 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
NCAM1-213ENST00000531044 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
NCAM1-213ENST00000531044 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
NCAM1-213ENST00000531044 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
NCAM1-213ENST00000531044 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
NCAM1-213ENST00000531044 HMGXB3Q12766 1538 aa14.8□□□□□ -0.04
NCAM1-213ENST00000531044 GOLGA3Q08378 1498 aa14.74□□□□□ -0.05
NCAM1-213ENST00000531044 EEA1Q15075 1411 aa14.72□□□□□ -0.05
NCAM1-213ENST00000531044 NESP48681 1621 aa14.7□□□□□ -0.06
NCAM1-213ENST00000531044 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
NCAM1-213ENST00000531044 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
NCAM1-213ENST00000531044 CLIP1P30622 1438 aa14.63□□□□□ -0.07
NCAM1-213ENST00000531044 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
NCAM1-213ENST00000531044 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
NCAM1-213ENST00000531044 KIF21BO75037 1637 aa14.58□□□□□ -0.08
NCAM1-213ENST00000531044 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
NCAM1-213ENST00000531044 APLP2Q06481 763 aa14.56□□□□□ -0.08
NCAM1-213ENST00000531044 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
NCAM1-213ENST00000531044 DHX57Q6P158 1386 aaKnown RBP14.53□□□□□ -0.08
NCAM1-213ENST00000531044 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
NCAM1-213ENST00000531044 TSHZ2Q9NRE2 1034 aa14.52□□□□□ -0.08
NCAM1-213ENST00000531044 CFTRP13569 1480 aa14.51□□□□□ -0.09
NCAM1-213ENST00000531044 CLSPNQ9HAW4 1339 aa14.47□□□□□ -0.09
NCAM1-213ENST00000531044 KCNH8Q96L42 1107 aa14.46□□□□□ -0.09
NCAM1-213ENST00000531044 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
NCAM1-213ENST00000531044 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
NCAM1-213ENST00000531044 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
NCAM1-213ENST00000531044 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
NCAM1-213ENST00000531044 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
NCAM1-213ENST00000531044 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
NCAM1-213ENST00000531044 BCANQ96GW7 911 aa14.39□□□□□ -0.11
NCAM1-213ENST00000531044 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
NCAM1-213ENST00000531044 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
NCAM1-213ENST00000531044 ITGAEP38570 1179 aa14.33□□□□□ -0.11
NCAM1-213ENST00000531044 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
NCAM1-213ENST00000531044 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
NCAM1-213ENST00000531044 FKBP8Q14318 412 aa14.3□□□□□ -0.12
NCAM1-213ENST00000531044 CUX1P39880 1505 aa14.29□□□□□ -0.12
NCAM1-213ENST00000531044 BCL11AQ9H165 835 aa14.29□□□□□ -0.12
NCAM1-213ENST00000531044 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
NCAM1-213ENST00000531044 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms