RNA–Protein interactions for RNA: ENST00000422117.1

LINC02250-201, Transcript of long intergenic non-protein coding RNA 2250, humanhuman

TSL 1 (best) BASIC

Gene LINC02250, Length 2,491 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02250-201ENST00000422117 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
LINC02250-201ENST00000422117 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
LINC02250-201ENST00000422117 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.42
LINC02250-201ENST00000422117 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
LINC02250-201ENST00000422117 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
LINC02250-201ENST00000422117 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
LINC02250-201ENST00000422117 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
LINC02250-201ENST00000422117 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
LINC02250-201ENST00000422117 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
LINC02250-201ENST00000422117 KCNA4P22459 653 aa16.39■□□□□ 0.21
LINC02250-201ENST00000422117 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
LINC02250-201ENST00000422117 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
LINC02250-201ENST00000422117 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.17
LINC02250-201ENST00000422117 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
LINC02250-201ENST00000422117 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
LINC02250-201ENST00000422117 ARXQ96QS3 562 aa15.58■□□□□ 0.09
LINC02250-201ENST00000422117 TAOK2Q9UL54 1235 aa15.51■□□□□ 0.07
LINC02250-201ENST00000422117 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
LINC02250-201ENST00000422117 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
LINC02250-201ENST00000422117 BCANQ96GW7 911 aa15.28■□□□□ 0.04
LINC02250-201ENST00000422117 APLP2Q06481 763 aa15.27■□□□□ 0.04
LINC02250-201ENST00000422117 ADRA2BP18089 450 aa15.17■□□□□ 0.02
LINC02250-201ENST00000422117 PLCB2Q00722 1185 aa15.13■□□□□ 0.01
LINC02250-201ENST00000422117 HOMEZQ8IX15 550 aa15.13■□□□□ 0.01
LINC02250-201ENST00000422117 ZBTB22O15209 634 aa15.1■□□□□ 0.01
LINC02250-201ENST00000422117 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0.01
LINC02250-201ENST00000422117 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
LINC02250-201ENST00000422117 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
LINC02250-201ENST00000422117 HAP1P54257 671 aaPredicted RBP15.01□□□□□ -0.01
LINC02250-201ENST00000422117 ERICH6Q7L0X2 663 aa15□□□□□ -0.01
LINC02250-201ENST00000422117 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
LINC02250-201ENST00000422117 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
LINC02250-201ENST00000422117 PODXL2Q9NZ53 605 aa14.91□□□□□ -0.02
LINC02250-201ENST00000422117 MYT1Q01538 1121 aa14.84□□□□□ -0.03
LINC02250-201ENST00000422117 FKBP8Q14318 412 aa14.69□□□□□ -0.06
LINC02250-201ENST00000422117 TMEM132AQ24JP5 1023 aa14.58□□□□□ -0.07
LINC02250-201ENST00000422117 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
LINC02250-201ENST00000422117 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
LINC02250-201ENST00000422117 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
LINC02250-201ENST00000422117 NPM2Q86SE8 214 aaKnown RBP14.51□□□□□ -0.09
LINC02250-201ENST00000422117 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
LINC02250-201ENST00000422117 FBLN2P98095 1184 aa14.44□□□□□ -0.1
LINC02250-201ENST00000422117 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
LINC02250-201ENST00000422117 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
LINC02250-201ENST00000422117 TRIM26Q12899 539 aaPredicted RBP14.32□□□□□ -0.12
LINC02250-201ENST00000422117 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
LINC02250-201ENST00000422117 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
LINC02250-201ENST00000422117 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
LINC02250-201ENST00000422117 UBTFP17480 764 aaKnown RBP14.18□□□□□ -0.14
LINC02250-201ENST00000422117 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
LINC02250-201ENST00000422117 HRCP23327 699 aa14.13□□□□□ -0.15
LINC02250-201ENST00000422117 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
LINC02250-201ENST00000422117 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
LINC02250-201ENST00000422117 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
LINC02250-201ENST00000422117 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
LINC02250-201ENST00000422117 PLEKHG5O94827 1062 aa14□□□□□ -0.17
LINC02250-201ENST00000422117 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
LINC02250-201ENST00000422117 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
LINC02250-201ENST00000422117 NBR1Q14596 966 aa13.86□□□□□ -0.19
LINC02250-201ENST00000422117 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
LINC02250-201ENST00000422117 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
LINC02250-201ENST00000422117 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC02250-201ENST00000422117 PKD2Q13563 968 aa13.66□□□□□ -0.22
LINC02250-201ENST00000422117 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
LINC02250-201ENST00000422117 IGSF3O75054 1194 aa13.57□□□□□ -0.24
LINC02250-201ENST00000422117 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
LINC02250-201ENST00000422117 ARID3AQ99856 593 aa13.53□□□□□ -0.24
LINC02250-201ENST00000422117 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
LINC02250-201ENST00000422117 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
LINC02250-201ENST00000422117 CDK11BP21127 795 aaKnown RBP13.44□□□□□ -0.26
LINC02250-201ENST00000422117 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
LINC02250-201ENST00000422117 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
LINC02250-201ENST00000422117 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
LINC02250-201ENST00000422117 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
LINC02250-201ENST00000422117 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
LINC02250-201ENST00000422117 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
LINC02250-201ENST00000422117 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
LINC02250-201ENST00000422117 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
LINC02250-201ENST00000422117 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
LINC02250-201ENST00000422117 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
LINC02250-201ENST00000422117 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
LINC02250-201ENST00000422117 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
LINC02250-201ENST00000422117 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
LINC02250-201ENST00000422117 DHX37Q8IY37 1157 aaKnown RBP13.27□□□□□ -0.29
LINC02250-201ENST00000422117 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
LINC02250-201ENST00000422117 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
LINC02250-201ENST00000422117 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
LINC02250-201ENST00000422117 RSPH6AQ9H0K4 717 aa13.16□□□□□ -0.3
LINC02250-201ENST00000422117 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
LINC02250-201ENST00000422117 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
LINC02250-201ENST00000422117 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
LINC02250-201ENST00000422117 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
LINC02250-201ENST00000422117 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
LINC02250-201ENST00000422117 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
LINC02250-201ENST00000422117 FOXD1Q16676 465 aa13.11□□□□□ -0.31
LINC02250-201ENST00000422117 RGL2O15211 777 aa13.11□□□□□ -0.31
LINC02250-201ENST00000422117 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
LINC02250-201ENST00000422117 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
LINC02250-201ENST00000422117 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
LINC02250-201ENST00000422117 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms