Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 LINC01124-201ENST00000409786 2117 ntBASIC21.7■■□□□ 1.06
SATB2Q9UPW6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SATB2Q9UPW6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 AC034268.1-201ENST00000441047 882 ntBASIC21.69■■□□□ 1.06
SATB2Q9UPW6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SATB2Q9UPW6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 AC090192.1-201ENST00000517740 490 ntBASIC21.68■■□□□ 1.06
SATB2Q9UPW6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SATB2Q9UPW6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 AC126544.1-201ENST00000580842 1059 ntBASIC21.67■■□□□ 1.06
SATB2Q9UPW6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.67■■□□□ 1.06
SATB2Q9UPW6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 RARRES2P11-201ENST00000635158 484 ntBASIC21.67■■□□□ 1.06
SATB2Q9UPW6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.67■■□□□ 1.06
SATB2Q9UPW6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.66■■□□□ 1.06
SATB2Q9UPW6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SATB2Q9UPW6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SATB2Q9UPW6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SATB2Q9UPW6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SATB2Q9UPW6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SATB2Q9UPW6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 AC022517.1-201ENST00000592429 346 ntBASIC21.64■■□□□ 1.05
SATB2Q9UPW6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SATB2Q9UPW6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
SATB2Q9UPW6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms