Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THUMPD3Q9BV44 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 AC127496.7-201ENST00000625110 1798 ntBASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
THUMPD3Q9BV44 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 AC079630.1-202ENST00000618127 1840 ntBASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THUMPD3Q9BV44 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 KRT8P33-201ENST00000508125 1423 ntBASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
THUMPD3Q9BV44 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 MIR4508-201ENST00000584178 70 ntBASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 ESRRAP2-201ENST00000418437 1549 ntBASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
THUMPD3Q9BV44 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 AC103834.1-201ENST00000520383 144 ntBASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
THUMPD3Q9BV44 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 AC120024.1-201ENST00000562672 995 ntBASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
THUMPD3Q9BV44 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 YBX1P4-201ENST00000392794 808 ntBASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD3Q9BV44 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms