Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ITCHQ96J02 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ITCHQ96J02 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.19■□□□□ 0.98
ITCHQ96J02 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ITCHQ96J02 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.19■□□□□ 0.98
ITCHQ96J02 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ITCHQ96J02 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.19■□□□□ 0.98
ITCHQ96J02 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ITCHQ96J02 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.18■□□□□ 0.98
ITCHQ96J02 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.18■□□□□ 0.98
ITCHQ96J02 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.18■□□□□ 0.98
ITCHQ96J02 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
ITCHQ96J02 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ITCHQ96J02 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ITCHQ96J02 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
ITCHQ96J02 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ITCHQ96J02 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ITCHQ96J02 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ITCHQ96J02 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ITCHQ96J02 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ITCHQ96J02 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.16■□□□□ 0.98
ITCHQ96J02 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
ITCHQ96J02 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 MIR4508-201ENST00000584178 70 ntBASIC21.16■□□□□ 0.98
ITCHQ96J02 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ITCHQ96J02 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ITCHQ96J02 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.15■□□□□ 0.98
ITCHQ96J02 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.15■□□□□ 0.98
ITCHQ96J02 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ITCHQ96J02 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ITCHQ96J02 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITCHQ96J02 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITCHQ96J02 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITCHQ96J02 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ITCHQ96J02 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ITCHQ96J02 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.14■□□□□ 0.98
ITCHQ96J02 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ITCHQ96J02 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ITCHQ96J02 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.14■□□□□ 0.98
ITCHQ96J02 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ITCHQ96J02 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.14■□□□□ 0.98
ITCHQ96J02 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.14■□□□□ 0.98
ITCHQ96J02 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ITCHQ96J02 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
ITCHQ96J02 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ITCHQ96J02 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.14■□□□□ 0.97
ITCHQ96J02 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.14■□□□□ 0.97
ITCHQ96J02 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.97
ITCHQ96J02 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ITCHQ96J02 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ITCHQ96J02 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ITCHQ96J02 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ITCHQ96J02 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ITCHQ96J02 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ITCHQ96J02 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ITCHQ96J02 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ITCHQ96J02 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ITCHQ96J02 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms