Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.66■■■□□ 2.66
PTPRUQ92729 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PTPRUQ92729 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
PTPRUQ92729 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PTPRUQ92729 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.66■■■□□ 2.66
PTPRUQ92729 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.66■■■□□ 2.66
PTPRUQ92729 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.66■■■□□ 2.66
PTPRUQ92729 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPRUQ92729 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPRUQ92729 AC105233.4-201ENST00000642045 216 ntBASIC31.65■■■□□ 2.66
PTPRUQ92729 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTPRUQ92729 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PTPRUQ92729 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.64■■■□□ 2.66
PTPRUQ92729 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PTPRUQ92729 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.64■■■□□ 2.66
PTPRUQ92729 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.64■■■□□ 2.66
PTPRUQ92729 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.64■■■□□ 2.66
PTPRUQ92729 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PTPRUQ92729 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
PTPRUQ92729 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.65
PTPRUQ92729 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
PTPRUQ92729 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPRUQ92729 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPRUQ92729 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
PTPRUQ92729 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPRUQ92729 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.63■■■□□ 2.65
PTPRUQ92729 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTPRUQ92729 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PTPRUQ92729 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
PTPRUQ92729 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
PTPRUQ92729 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.62■■■□□ 2.65
PTPRUQ92729 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.62■■■□□ 2.65
PTPRUQ92729 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.62■■■□□ 2.65
PTPRUQ92729 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PTPRUQ92729 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PTPRUQ92729 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.61■■■□□ 2.65
PTPRUQ92729 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.61■■■□□ 2.65
PTPRUQ92729 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.61■■■□□ 2.65
PTPRUQ92729 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.61■■■□□ 2.65
PTPRUQ92729 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.6■■■□□ 2.65
PTPRUQ92729 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.6■■■□□ 2.65
PTPRUQ92729 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.6■■■□□ 2.65
PTPRUQ92729 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
PTPRUQ92729 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPRUQ92729 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PTPRUQ92729 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPRUQ92729 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
PTPRUQ92729 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPRUQ92729 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.59■■■□□ 2.65
PTPRUQ92729 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.59■■■□□ 2.65
PTPRUQ92729 DUX4L4-201ENST00000566884 1269 ntBASIC31.59■■■□□ 2.65
PTPRUQ92729 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC31.59■■■□□ 2.65
PTPRUQ92729 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPRUQ92729 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PTPRUQ92729 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.59■■■□□ 2.65
PTPRUQ92729 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PTPRUQ92729 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPRUQ92729 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPRUQ92729 CROCCP5-201ENST00000436658 830 ntBASIC31.58■■■□□ 2.65
PTPRUQ92729 AC137761.2-201ENST00000561729 223 ntBASIC31.58■■■□□ 2.65
PTPRUQ92729 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.58■■■□□ 2.65
PTPRUQ92729 AC145350.3-201ENST00000569033 163 ntBASIC31.58■■■□□ 2.65
PTPRUQ92729 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.58■■■□□ 2.65
PTPRUQ92729 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.58■■■□□ 2.65
PTPRUQ92729 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.58■■■□□ 2.65
PTPRUQ92729 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPRUQ92729 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPRUQ92729 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPRUQ92729 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
PTPRUQ92729 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PTPRUQ92729 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.58■■■□□ 2.65
PTPRUQ92729 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.58■■■□□ 2.65
PTPRUQ92729 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
PTPRUQ92729 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.58■■■□□ 2.65
PTPRUQ92729 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
PTPRUQ92729 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.58■■■□□ 2.65
PTPRUQ92729 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.58■■■□□ 2.65
PTPRUQ92729 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
PTPRUQ92729 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.57■■■□□ 2.64
PTPRUQ92729 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPRUQ92729 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPRUQ92729 AP004607.4-201ENST00000530158 1459 ntBASIC31.57■■■□□ 2.64
PTPRUQ92729 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPRUQ92729 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPRUQ92729 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPRUQ92729 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.57■■■□□ 2.64
PTPRUQ92729 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.57■■■□□ 2.64
PTPRUQ92729 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTPRUQ92729 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTPRUQ92729 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTPRUQ92729 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
PTPRUQ92729 AC004854.2-201ENST00000608450 1441 ntBASIC31.56■■■□□ 2.64
PTPRUQ92729 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTPRUQ92729 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PTPRUQ92729 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PTPRUQ92729 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
PTPRUQ92729 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PTPRUQ92729 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.55■■■□□ 2.64
PTPRUQ92729 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.55■■■□□ 2.64
PTPRUQ92729 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms