Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35AQ53FP2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEM35AQ53FP2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM35AQ53FP2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM35AQ53FP2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TMEM35AQ53FP2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM35AQ53FP2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM35AQ53FP2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 AL512631.2-201ENST00000604634 923 ntBASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 AC009086.3-201ENST00000623486 1008 ntBASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TMEM35AQ53FP2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 SRD5A1P1-201ENST00000442297 786 ntBASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.2■□□□□ 0.98
TMEM35AQ53FP2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM35AQ53FP2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.18■□□□□ 0.98
TMEM35AQ53FP2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 AC068473.5-201ENST00000616428 2072 ntBASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 AC092171.4-201ENST00000609130 632 ntBASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM35AQ53FP2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TMEM35AQ53FP2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM35AQ53FP2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms