Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HCN1O60741 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN1O60741 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCN1O60741 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HCN1O60741 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.73■□□□□ 0.91
HCN1O60741 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCN1O60741 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCN1O60741 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCN1O60741 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.73■□□□□ 0.91
HCN1O60741 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HCN1O60741 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HCN1O60741 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCN1O60741 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCN1O60741 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.71■□□□□ 0.91
HCN1O60741 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCN1O60741 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HCN1O60741 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.71■□□□□ 0.91
HCN1O60741 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCN1O60741 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCN1O60741 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCN1O60741 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCN1O60741 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.7■□□□□ 0.9
HCN1O60741 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCN1O60741 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.7■□□□□ 0.9
HCN1O60741 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.7■□□□□ 0.9
HCN1O60741 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCN1O60741 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCN1O60741 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HCN1O60741 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HCN1O60741 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.69■□□□□ 0.9
HCN1O60741 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 MIR638-201ENST00000385237 100 ntBASIC20.69■□□□□ 0.9
HCN1O60741 SRD5A1P1-201ENST00000442297 786 ntBASIC20.69■□□□□ 0.9
HCN1O60741 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.69■□□□□ 0.9
HCN1O60741 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.69■□□□□ 0.9
HCN1O60741 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HCN1O60741 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.68■□□□□ 0.9
HCN1O60741 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 AC096631.2-201ENST00000436136 790 ntBASIC20.68■□□□□ 0.9
HCN1O60741 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.68■□□□□ 0.9
HCN1O60741 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.68■□□□□ 0.9
HCN1O60741 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.68■□□□□ 0.9
HCN1O60741 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.68■□□□□ 0.9
HCN1O60741 ANOS2P-203ENST00000472227 1816 ntBASIC20.68■□□□□ 0.9
HCN1O60741 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HCN1O60741 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.68■□□□□ 0.9
HCN1O60741 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN1O60741 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HCN1O60741 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.67■□□□□ 0.9
HCN1O60741 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HCN1O60741 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HCN1O60741 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
HCN1O60741 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HCN1O60741 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.67■□□□□ 0.9
HCN1O60741 AC110285.6-201ENST00000617652 491 ntBASIC20.67■□□□□ 0.9
HCN1O60741 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HCN1O60741 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.67■□□□□ 0.9
HCN1O60741 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HCN1O60741 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN1O60741 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.66■□□□□ 0.9
HCN1O60741 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.66■□□□□ 0.9
HCN1O60741 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.66■□□□□ 0.9
HCN1O60741 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN1O60741 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HCN1O60741 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms