Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3EA5X5Y0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 AL391422.3-201ENST00000603791 2761 ntBASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3EA5X5Y0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 AC010980.1-201ENST00000587192 1142 ntBASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTR3EA5X5Y0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HTR3EA5X5Y0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HTR3EA5X5Y0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTR3EA5X5Y0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR3EA5X5Y0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR3EA5X5Y0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR3EA5X5Y0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR3EA5X5Y0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HTR3EA5X5Y0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HTR3EA5X5Y0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3EA5X5Y0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3EA5X5Y0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR3EA5X5Y0 YBX1P4-201ENST00000392794 808 ntBASIC20.46■□□□□ 0.87
HTR3EA5X5Y0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms