Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ATRXP46100 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 MED20-204ENST00000409312 932 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 MIR3194-201ENST00000582236 73 ntBASIC12.42□□□□□ -0.42
ATRXP46100 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ATRXP46100 AL022313.4-201ENST00000562756 2046 ntBASIC12.42□□□□□ -0.42
ATRXP46100 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ATRXP46100 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ATRXP46100 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 CTF2P-201ENST00000412003 604 ntBASIC12.42□□□□□ -0.42
ATRXP46100 OR10AA1P-201ENST00000417823 937 ntBASIC12.42□□□□□ -0.42
ATRXP46100 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
ATRXP46100 RN7SL2-201ENST00000490232 300 ntBASIC12.42□□□□□ -0.42
ATRXP46100 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC12.42□□□□□ -0.42
ATRXP46100 RN7SL229P-201ENST00000495651 299 ntBASIC12.42□□□□□ -0.42
ATRXP46100 IGHVII-74-1-201ENST00000517572 241 ntBASIC12.42□□□□□ -0.42
ATRXP46100 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.42□□□□□ -0.42
ATRXP46100 RN7SL4P-201ENST00000584058 295 ntBASIC12.42□□□□□ -0.42
ATRXP46100 AL137028.2-201ENST00000614601 256 ntBASIC12.42□□□□□ -0.42
ATRXP46100 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATRXP46100 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
ATRXP46100 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ATRXP46100 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.41□□□□□ -0.42
ATRXP46100 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 AL354702.1-201ENST00000442006 1960 ntBASIC12.41□□□□□ -0.42
ATRXP46100 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
ATRXP46100 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ATRXP46100 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 TPI1P3-201ENST00000335020 740 ntBASIC12.41□□□□□ -0.42
ATRXP46100 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 AC007322.2-201ENST00000414540 605 ntBASIC12.41□□□□□ -0.42
ATRXP46100 EEF1GP3-201ENST00000421044 1288 ntBASIC12.41□□□□□ -0.42
ATRXP46100 AL390726.1-201ENST00000451357 202 ntBASIC12.41□□□□□ -0.42
ATRXP46100 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.41□□□□□ -0.42
ATRXP46100 MT1G-204ENST00000569500 305 ntTSL 3 BASIC12.41□□□□□ -0.42
ATRXP46100 AC136475.9-201ENST00000605240 497 ntBASIC12.41□□□□□ -0.42
ATRXP46100 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
ATRXP46100 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.41□□□□□ -0.42
ATRXP46100 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.41□□□□□ -0.42
ATRXP46100 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.41□□□□□ -0.42
ATRXP46100 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.41□□□□□ -0.42
ATRXP46100 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.41□□□□□ -0.42
ATRXP46100 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATRXP46100 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ATRXP46100 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC12.4□□□□□ -0.42
ATRXP46100 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATRXP46100 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
ATRXP46100 ALG1L14P-201ENST00000514230 434 ntBASIC12.4□□□□□ -0.42
ATRXP46100 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC12.4□□□□□ -0.42
ATRXP46100 AC103810.4-201ENST00000578601 257 ntBASIC12.4□□□□□ -0.42
ATRXP46100 HNRNPA1P11-201ENST00000580106 956 ntBASIC12.4□□□□□ -0.42
ATRXP46100 UBA3-212ENST00000630585 390 ntTSL 4 BASIC12.4□□□□□ -0.42
ATRXP46100 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ATRXP46100 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.4□□□□□ -0.42
ATRXP46100 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.4□□□□□ -0.42
ATRXP46100 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.4□□□□□ -0.42
ATRXP46100 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATRXP46100 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ATRXP46100 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ATRXP46100 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.4□□□□□ -0.42
ATRXP46100 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms