Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 RN7SL258P-201ENST00000478664 300 ntBASIC14.37□□□□□ -0.11
MMP13P45452 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 NUP210P1-202ENST00000504322 710 ntBASIC14.37□□□□□ -0.11
MMP13P45452 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP13P45452 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP13P45452 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP13P45452 RN7SL455P-201ENST00000580629 282 ntBASIC14.37□□□□□ -0.11
MMP13P45452 MIR4754-201ENST00000582477 89 ntBASIC14.37□□□□□ -0.11
MMP13P45452 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 AL021707.6-201ENST00000609212 491 ntBASIC14.37□□□□□ -0.11
MMP13P45452 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 SNORA50.1-201ENST00000628590 135 ntBASIC14.37□□□□□ -0.11
MMP13P45452 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP13P45452 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
MMP13P45452 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP13P45452 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MMP13P45452 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 AL133466.1-201ENST00000447582 150 ntBASIC14.36□□□□□ -0.11
MMP13P45452 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.36□□□□□ -0.11
MMP13P45452 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
MMP13P45452 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 CU633904.3-201ENST00000624042 1029 ntBASIC14.36□□□□□ -0.11
MMP13P45452 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 AC138627.1-207ENST00000641560 1006 ntBASIC14.36□□□□□ -0.11
MMP13P45452 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.36□□□□□ -0.11
MMP13P45452 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.36□□□□□ -0.11
MMP13P45452 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MMP13P45452 AL133338.1-201ENST00000565695 1517 ntBASIC14.36□□□□□ -0.11
MMP13P45452 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP13P45452 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 KRT8P31-201ENST00000504812 1408 ntBASIC14.35□□□□□ -0.11
MMP13P45452 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP13P45452 AC020917.4-201ENST00000623994 1999 ntBASIC14.35□□□□□ -0.11
MMP13P45452 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MMP13P45452 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP13P45452 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.35□□□□□ -0.11
MMP13P45452 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP13P45452 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP13P45452 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.35□□□□□ -0.11
MMP13P45452 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP13P45452 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms