Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 RN7SKP155-201ENST00000516031 288 ntBASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 HERC2P11-201ENST00000562845 725 ntBASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 AC100756.2-201ENST00000569537 736 ntBASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 Z82244.1-201ENST00000631502 840 ntBASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB9F8W1W9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC026316.1-201ENST00000398900 414 ntBASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC007952.4-201ENST00000573866 637 ntBASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC103691.2-201ENST00000618824 433 ntBASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC025262.2-201ENST00000623975 1056 ntBASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 GHET1-201ENST00000627071 1906 ntBASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB9F8W1W9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB9F8W1W9 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.55□□□□□ -0.4
NPIPB9F8W1W9 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB9F8W1W9 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NPIPB9F8W1W9 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms