Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC012531.1-201ENST00000562848 2680 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 TSPY25P-201ENST00000429463 745 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 AC007279.1-201ENST00000448547 837 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 MIR3940-201ENST00000579148 102 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 FAM90A11P-201ENST00000518378 2218 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 STRCP1-201ENST00000509801 5328 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 AC020763.3-201ENST00000625095 2904 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 IL9RP3-201ENST00000442856 1674 ntBASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
CLDN22Q8N7P3 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 AC006987.1-201ENST00000413610 527 ntBASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 NKAIN1P1-201ENST00000435754 582 ntBASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 AC104306.2-201ENST00000451877 341 ntBASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 SERPINA13P-202ENST00000478994 924 ntBASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 FAM8A2P-201ENST00000528813 1142 ntBASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN22Q8N7P3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms