Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 LYPLA2P1-203ENST00000447689 696 ntBASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC025186.1-201ENST00000478174 870 ntBASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC226150.1-201ENST00000544259 466 ntBASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 KRT18P8-201ENST00000581937 1246 ntBASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 AC002044.2-201ENST00000624910 970 ntBASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 SALL4P6-201ENST00000429385 1691 ntBASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PRAMEF20Q5VT98 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AL359881.3-201ENST00000602640 1721 ntBASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AC089987.1-201ENST00000551654 2209 ntBASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 MIR4750-201ENST00000584564 56 ntBASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 LINC00638-201ENST00000555578 2518 ntBASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PRAMEF20Q5VT98 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
PRAMEF20Q5VT98 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
PRAMEF20Q5VT98 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms