Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 HMGN1P4-201ENST00000419500 290 ntBASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 HNRNPA1P55-201ENST00000505935 955 ntBASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AC063977.2-201ENST00000601996 421 ntBASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AC006273.1-201ENST00000606966 861 ntBASIC16.92■□□□□ 0.3
RC3H1Q5TC82 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 AC124319.4-201ENST00000622931 2161 ntBASIC16.92■□□□□ 0.3
RC3H1Q5TC82 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RC3H1Q5TC82 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 MST1P2-201ENST00000457982 2291 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 FAM183BP-201ENST00000409072 1595 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 KLK8-203ENST00000347619 555 ntTSL 2 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 MIR324-201ENST00000362183 83 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AC099343.1-201ENST00000513481 609 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 MIR6893-201ENST00000613458 69 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 MFSD12-215ENST00000615613 688 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 TUBA3GP-201ENST00000410028 1325 ntBASIC16.91■□□□□ 0.3
RC3H1Q5TC82 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RC3H1Q5TC82 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RC3H1Q5TC82 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms