RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.57
LINC00299-203ENST00000444688 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
LINC00299-203ENST00000444688 ABCC9O60706 1549 aa26.4■■□□□ 1.82
LINC00299-203ENST00000444688 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
LINC00299-203ENST00000444688 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
LINC00299-203ENST00000444688 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
LINC00299-203ENST00000444688 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
LINC00299-203ENST00000444688 NACADO15069 1562 aa25.73■■□□□ 1.71
LINC00299-203ENST00000444688 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
LINC00299-203ENST00000444688 SCRIBQ14160 1630 aa25.07■■□□□ 1.6
LINC00299-203ENST00000444688 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
LINC00299-203ENST00000444688 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
LINC00299-203ENST00000444688 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
LINC00299-203ENST00000444688 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
LINC00299-203ENST00000444688 CECR2Q9BXF3 1484 aa24.17■■□□□ 1.46
LINC00299-203ENST00000444688 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
LINC00299-203ENST00000444688 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
LINC00299-203ENST00000444688 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
LINC00299-203ENST00000444688 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
LINC00299-203ENST00000444688 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
LINC00299-203ENST00000444688 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
LINC00299-203ENST00000444688 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
LINC00299-203ENST00000444688 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
LINC00299-203ENST00000444688 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
LINC00299-203ENST00000444688 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
LINC00299-203ENST00000444688 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
LINC00299-203ENST00000444688 WIZO95785 1651 aa23.72■■□□□ 1.39
LINC00299-203ENST00000444688 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
LINC00299-203ENST00000444688 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.38
LINC00299-203ENST00000444688 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
LINC00299-203ENST00000444688 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
LINC00299-203ENST00000444688 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
LINC00299-203ENST00000444688 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
LINC00299-203ENST00000444688 CFTRP13569 1480 aa23.04■■□□□ 1.28
LINC00299-203ENST00000444688 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
LINC00299-203ENST00000444688 NESP48681 1621 aa22.97■■□□□ 1.27
LINC00299-203ENST00000444688 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
LINC00299-203ENST00000444688 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
LINC00299-203ENST00000444688 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
LINC00299-203ENST00000444688 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
LINC00299-203ENST00000444688 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
LINC00299-203ENST00000444688 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
LINC00299-203ENST00000444688 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
LINC00299-203ENST00000444688 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
LINC00299-203ENST00000444688 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
LINC00299-203ENST00000444688 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
LINC00299-203ENST00000444688 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
LINC00299-203ENST00000444688 WDR62O43379 1518 aa22.51■■□□□ 1.19
LINC00299-203ENST00000444688 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
LINC00299-203ENST00000444688 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
LINC00299-203ENST00000444688 CUX1P39880 1505 aa22.47■■□□□ 1.19
LINC00299-203ENST00000444688 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
LINC00299-203ENST00000444688 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
LINC00299-203ENST00000444688 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
LINC00299-203ENST00000444688 CUX2O14529 1486 aa22.36■■□□□ 1.17
LINC00299-203ENST00000444688 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
LINC00299-203ENST00000444688 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
LINC00299-203ENST00000444688 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
LINC00299-203ENST00000444688 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
LINC00299-203ENST00000444688 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
LINC00299-203ENST00000444688 SOGA1O94964 1423 aa22.24■■□□□ 1.15
LINC00299-203ENST00000444688 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
LINC00299-203ENST00000444688 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
LINC00299-203ENST00000444688 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
LINC00299-203ENST00000444688 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
LINC00299-203ENST00000444688 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
LINC00299-203ENST00000444688 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
LINC00299-203ENST00000444688 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
LINC00299-203ENST00000444688 ABCA5Q8WWZ7 1642 aa22.01■■□□□ 1.11
LINC00299-203ENST00000444688 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
LINC00299-203ENST00000444688 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
LINC00299-203ENST00000444688 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
LINC00299-203ENST00000444688 EEA1Q15075 1411 aa21.95■■□□□ 1.1
LINC00299-203ENST00000444688 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
LINC00299-203ENST00000444688 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
LINC00299-203ENST00000444688 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
LINC00299-203ENST00000444688 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
LINC00299-203ENST00000444688 IGF1RP08069 1367 aa21.87■■□□□ 1.09
LINC00299-203ENST00000444688 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
LINC00299-203ENST00000444688 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
LINC00299-203ENST00000444688 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
LINC00299-203ENST00000444688 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
LINC00299-203ENST00000444688 CUL7Q14999 1698 aa21.79■■□□□ 1.08
LINC00299-203ENST00000444688 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
LINC00299-203ENST00000444688 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
LINC00299-203ENST00000444688 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
LINC00299-203ENST00000444688 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
LINC00299-203ENST00000444688 PRXQ9BXM0 1461 aa21.72■■□□□ 1.07
LINC00299-203ENST00000444688 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
LINC00299-203ENST00000444688 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
LINC00299-203ENST00000444688 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
LINC00299-203ENST00000444688 FBLN2P98095 1184 aa21.64■■□□□ 1.05
LINC00299-203ENST00000444688 KIF21BO75037 1637 aa21.64■■□□□ 1.05
LINC00299-203ENST00000444688 CHD1O14646 1710 aa21.6■■□□□ 1.05
LINC00299-203ENST00000444688 GOLGA3Q08378 1498 aa21.58■■□□□ 1.04
LINC00299-203ENST00000444688 NUP160Q12769 1436 aa21.55■■□□□ 1.04
LINC00299-203ENST00000444688 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
LINC00299-203ENST00000444688 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
LINC00299-203ENST00000444688 KIAA0586Q9BVV6 1533 aa21.46■■□□□ 1.03
LINC00299-203ENST00000444688 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms