Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
AP1S2P56377 AL662890.1-201ENST00000396818 632 ntBASIC13.46□□□□□ -0.25
AP1S2P56377 OR2W2P-201ENST00000406313 909 ntBASIC13.46□□□□□ -0.25
AP1S2P56377 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 AC245884.6-201ENST00000515672 1067 ntBASIC13.46□□□□□ -0.25
AP1S2P56377 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.46□□□□□ -0.25
AP1S2P56377 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.46□□□□□ -0.25
AP1S2P56377 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 AC012073.1-201ENST00000606114 1108 ntBASIC13.46□□□□□ -0.25
AP1S2P56377 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S2P56377 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
AP1S2P56377 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S2P56377 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.46□□□□□ -0.26
AP1S2P56377 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.46□□□□□ -0.26
AP1S2P56377 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 ODCP-201ENST00000459650 1639 ntBASIC13.46□□□□□ -0.26
AP1S2P56377 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S2P56377 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 AC019109.1-201ENST00000401725 1874 ntBASIC13.45□□□□□ -0.26
AP1S2P56377 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
AP1S2P56377 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 RPL3P2-204ENST00000413027 1203 ntBASIC13.45□□□□□ -0.26
AP1S2P56377 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.45□□□□□ -0.26
AP1S2P56377 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.45□□□□□ -0.26
AP1S2P56377 AC138701.2-201ENST00000553634 226 ntBASIC13.45□□□□□ -0.26
AP1S2P56377 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.45□□□□□ -0.26
AP1S2P56377 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AP1S2P56377 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 AC002350.2-201ENST00000623894 1828 ntBASIC13.45□□□□□ -0.26
AP1S2P56377 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S2P56377 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S2P56377 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AP1S2P56377 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S2P56377 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S2P56377 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms