Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN5O00501 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN5O00501 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN5O00501 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN5O00501 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN5O00501 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN5O00501 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN5O00501 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN5O00501 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 AC135782.3-201ENST00000562782 2105 ntBASIC14.5□□□□□ -0.09
CLDN5O00501 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLDN5O00501 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN5O00501 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 AC132812.1-201ENST00000583145 892 ntBASIC14.5□□□□□ -0.09
CLDN5O00501 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN5O00501 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.5□□□□□ -0.09
CLDN5O00501 AC010976.2-201ENST00000609697 852 ntBASIC14.5□□□□□ -0.09
CLDN5O00501 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN5O00501 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN5O00501 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN5O00501 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN5O00501 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 AC092053.3-201ENST00000641308 4975 ntBASIC14.49□□□□□ -0.09
CLDN5O00501 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 AL359845.1-201ENST00000458202 1648 ntBASIC14.49□□□□□ -0.09
CLDN5O00501 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN5O00501 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CLDN5O00501 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.49□□□□□ -0.09
CLDN5O00501 AC093909.3-201ENST00000504783 336 ntBASIC14.49□□□□□ -0.09
CLDN5O00501 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.49□□□□□ -0.09
CLDN5O00501 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.49□□□□□ -0.09
CLDN5O00501 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN5O00501 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CLDN5O00501 MIR6727-201ENST00000620702 65 ntBASIC14.49□□□□□ -0.09
CLDN5O00501 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN5O00501 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLDN5O00501 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN5O00501 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLDN5O00501 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CLDN5O00501 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN5O00501 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN5O00501 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms