Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 BNIP3P13-201ENST00000599968 566 ntBASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 AL022334.2-201ENST00000610000 484 ntBASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHAMP1Q96JM3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 FAM58BP-201ENST00000439056 645 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC021723.1-201ENST00000486306 515 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 CHCHD2P2-201ENST00000503744 321 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC116345.2-201ENST00000512837 523 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 SNORD3B-2-202ENST00000571722 791 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AL139099.5-201ENST00000635274 300 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 AC068587.8-201ENST00000641239 219 ntBASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHAMP1Q96JM3 DDX12P-201ENST00000432996 2947 ntBASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.02■□□□□ 0.15
CHAMP1Q96JM3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms