RNA–Protein interactions for RNA: ENST00000530617.5

PAK1-215, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 2 BASIC

Gene PAK1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-215ENST00000530617 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
PAK1-215ENST00000530617 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
PAK1-215ENST00000530617 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
PAK1-215ENST00000530617 SHROOM4Q9ULL8 1493 aa24.88■■□□□ 1.57
PAK1-215ENST00000530617 ZCCHC6Q5VYS8 1495 aaKnown RBP24.84■■□□□ 1.57
PAK1-215ENST00000530617 ABCC9O60706 1549 aa24.55■■□□□ 1.52
PAK1-215ENST00000530617 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
PAK1-215ENST00000530617 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
PAK1-215ENST00000530617 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
PAK1-215ENST00000530617 NACADO15069 1562 aa23.78■■□□□ 1.4
PAK1-215ENST00000530617 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
PAK1-215ENST00000530617 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
PAK1-215ENST00000530617 PABPN1Q86U42 306 aaKnown RBP eCLIP23.37■■□□□ 1.33
PAK1-215ENST00000530617 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
PAK1-215ENST00000530617 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
PAK1-215ENST00000530617 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
PAK1-215ENST00000530617 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
PAK1-215ENST00000530617 BICRAQ9NZM4 1560 aa22.96■■□□□ 1.27
PAK1-215ENST00000530617 WIZO95785 1651 aa22.82■■□□□ 1.24
PAK1-215ENST00000530617 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
PAK1-215ENST00000530617 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
PAK1-215ENST00000530617 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
PAK1-215ENST00000530617 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
PAK1-215ENST00000530617 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
PAK1-215ENST00000530617 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
PAK1-215ENST00000530617 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
PAK1-215ENST00000530617 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
PAK1-215ENST00000530617 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
PAK1-215ENST00000530617 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
PAK1-215ENST00000530617 FAM9AQ8IZU1 332 aaPredicted RBP22.26■■□□□ 1.15
PAK1-215ENST00000530617 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
PAK1-215ENST00000530617 EHMT2Q96KQ7 1210 aa22.2■■□□□ 1.14
PAK1-215ENST00000530617 LOC105371045A0A1W2PR82 267 aa22.17■■□□□ 1.14
PAK1-215ENST00000530617 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
PAK1-215ENST00000530617 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
PAK1-215ENST00000530617 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
PAK1-215ENST00000530617 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
PAK1-215ENST00000530617 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
PAK1-215ENST00000530617 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
PAK1-215ENST00000530617 SOGA1O94964 1423 aa21.71■■□□□ 1.07
PAK1-215ENST00000530617 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
PAK1-215ENST00000530617 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.06
PAK1-215ENST00000530617 CFTRP13569 1480 aa21.64■■□□□ 1.06
PAK1-215ENST00000530617 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
PAK1-215ENST00000530617 NESP48681 1621 aa21.58■■□□□ 1.04
PAK1-215ENST00000530617 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
PAK1-215ENST00000530617 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
PAK1-215ENST00000530617 CUX1P39880 1505 aa21.46■■□□□ 1.03
PAK1-215ENST00000530617 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
PAK1-215ENST00000530617 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
PAK1-215ENST00000530617 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
PAK1-215ENST00000530617 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
PAK1-215ENST00000530617 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
PAK1-215ENST00000530617 EEA1Q15075 1411 aa21.33■■□□□ 1
PAK1-215ENST00000530617 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
PAK1-215ENST00000530617 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
PAK1-215ENST00000530617 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
PAK1-215ENST00000530617 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
PAK1-215ENST00000530617 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
PAK1-215ENST00000530617 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
PAK1-215ENST00000530617 CUX2O14529 1486 aa21.21■□□□□ 0.99
PAK1-215ENST00000530617 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
PAK1-215ENST00000530617 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.99
PAK1-215ENST00000530617 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
PAK1-215ENST00000530617 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
PAK1-215ENST00000530617 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
PAK1-215ENST00000530617 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
PAK1-215ENST00000530617 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
PAK1-215ENST00000530617 TNIKQ9UKE5 1360 aa21.15■□□□□ 0.98
PAK1-215ENST00000530617 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
PAK1-215ENST00000530617 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
PAK1-215ENST00000530617 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
PAK1-215ENST00000530617 KIF21AQ7Z4S6 1674 aa21.09■□□□□ 0.97
PAK1-215ENST00000530617 KIF21BO75037 1637 aa21.04■□□□□ 0.96
PAK1-215ENST00000530617 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
PAK1-215ENST00000530617 IGF1RP08069 1367 aa21.03■□□□□ 0.96
PAK1-215ENST00000530617 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
PAK1-215ENST00000530617 CLIP1P30622 1438 aa20.99■□□□□ 0.95
PAK1-215ENST00000530617 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
PAK1-215ENST00000530617 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
PAK1-215ENST00000530617 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
PAK1-215ENST00000530617 ABCA10Q8WWZ4 1543 aa20.91■□□□□ 0.94
PAK1-215ENST00000530617 MRC2Q9UBG0 1479 aa20.89■□□□□ 0.93
PAK1-215ENST00000530617 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
PAK1-215ENST00000530617 P3H3Q8IVL6 736 aa20.84■□□□□ 0.93
PAK1-215ENST00000530617 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.92
PAK1-215ENST00000530617 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
PAK1-215ENST00000530617 APLP2Q06481 763 aa20.77■□□□□ 0.92
PAK1-215ENST00000530617 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
PAK1-215ENST00000530617 VPS8Q8N3P4 1428 aa20.73■□□□□ 0.91
PAK1-215ENST00000530617 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
PAK1-215ENST00000530617 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
PAK1-215ENST00000530617 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
PAK1-215ENST00000530617 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
PAK1-215ENST00000530617 WDR62O43379 1518 aa20.68■□□□□ 0.9
PAK1-215ENST00000530617 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
PAK1-215ENST00000530617 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
PAK1-215ENST00000530617 FBLN2P98095 1184 aa20.66■□□□□ 0.9
PAK1-215ENST00000530617 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
PAK1-215ENST00000530617 THOC2Q8NI27 1593 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms