Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN20P56880 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN20P56880 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN20P56880 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 MIR645-201ENST00000385283 94 ntBASIC12.75□□□□□ -0.37
CLDN20P56880 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 SHMT1P1-201ENST00000419974 1312 ntBASIC12.75□□□□□ -0.37
CLDN20P56880 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN20P56880 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.75□□□□□ -0.37
CLDN20P56880 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN20P56880 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 AC005740.1-201ENST00000515639 522 ntBASIC12.75□□□□□ -0.37
CLDN20P56880 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN20P56880 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 AC079328.1-201ENST00000560358 952 ntBASIC12.75□□□□□ -0.37
CLDN20P56880 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLDN20P56880 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 Z98257.2-202ENST00000641138 1548 ntBASIC12.75□□□□□ -0.37
CLDN20P56880 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLDN20P56880 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLDN20P56880 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN20P56880 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN20P56880 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CLDN20P56880 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CLDN20P56880 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN20P56880 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 RPL13AP3-202ENST00000494676 1473 ntBASIC12.74□□□□□ -0.37
CLDN20P56880 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN20P56880 AL590824.1-201ENST00000403828 1349 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms