Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.57■□□□□ 0.24
POLR3DP05423 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 AC008620.2-201ENST00000510294 1569 ntBASIC16.57■□□□□ 0.24
POLR3DP05423 AC025183.3-201ENST00000623526 1482 ntBASIC16.57■□□□□ 0.24
POLR3DP05423 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.57■□□□□ 0.24
POLR3DP05423 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
POLR3DP05423 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 ACTG1P19-201ENST00000418987 1116 ntBASIC16.57■□□□□ 0.24
POLR3DP05423 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 LINC00634-202ENST00000505157 222 ntBASIC16.57■□□□□ 0.24
POLR3DP05423 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.57■□□□□ 0.24
POLR3DP05423 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.57■□□□□ 0.24
POLR3DP05423 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 AC012073.1-201ENST00000606114 1108 ntBASIC16.57■□□□□ 0.24
POLR3DP05423 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
POLR3DP05423 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
POLR3DP05423 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
POLR3DP05423 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
POLR3DP05423 MEX3B-202ENST00000558133 4333 ntBASIC16.56■□□□□ 0.24
POLR3DP05423 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 OR7E115P-201ENST00000382617 1024 ntBASIC16.56■□□□□ 0.24
POLR3DP05423 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
POLR3DP05423 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.56■□□□□ 0.24
POLR3DP05423 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.56■□□□□ 0.24
POLR3DP05423 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 EEF1GP8-201ENST00000506566 1154 ntBASIC16.56■□□□□ 0.24
POLR3DP05423 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.56■□□□□ 0.24
POLR3DP05423 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 AC138466.5-201ENST00000624002 808 ntBASIC16.56■□□□□ 0.24
POLR3DP05423 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.56■□□□□ 0.24
POLR3DP05423 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.56■□□□□ 0.24
POLR3DP05423 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
POLR3DP05423 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
POLR3DP05423 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
POLR3DP05423 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.55■□□□□ 0.24
POLR3DP05423 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms