Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 PXK-210ENST00000479241 2817 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 ABCD1P2-201ENST00000429313 1601 ntBASIC10.73□□□□□ -0.69
TRBV12-3P01733 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRBV12-3P01733 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.73□□□□□ -0.69
TRBV12-3P01733 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC020917.4-201ENST00000623994 1999 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 PCDHA6-201ENST00000378126 3267 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 MANEA-AS1-201ENST00000564541 2268 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC079781.5-202ENST00000641784 3743 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SNORA50C-201ENST00000408535 133 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RGS5-216ENST00000449680 788 ntTSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 CHCHD2P9-201ENST00000461726 456 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RN7SL564P-201ENST00000496309 250 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 MIR2392-201ENST00000584881 84 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 AL049840.2-201ENST00000602722 535 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC091769.1-201ENST00000619576 568 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SNORA50.1-201ENST00000628590 135 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC074138.1-201ENST00000611182 1303 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 FTX-216ENST00000638985 1367 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC040160.2-201ENST00000623816 1675 ntBASIC10.72□□□□□ -0.69
TRBV12-3P01733 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms