Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.25■□□□□ 0.03
USP8P40818 AL132994.2-201ENST00000603120 687 ntBASIC15.25■□□□□ 0.03
USP8P40818 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
USP8P40818 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 AC068760.1-201ENST00000493579 1953 ntBASIC15.25■□□□□ 0.03
USP8P40818 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
USP8P40818 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
USP8P40818 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 AC073957.3-201ENST00000609998 6758 ntBASIC15.24■□□□□ 0.03
USP8P40818 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
USP8P40818 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.24■□□□□ 0.03
USP8P40818 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
USP8P40818 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
USP8P40818 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
USP8P40818 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
USP8P40818 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.24■□□□□ 0.03
USP8P40818 AC108725.1-201ENST00000495472 409 ntBASIC15.24■□□□□ 0.03
USP8P40818 RCC2P8-201ENST00000502779 1035 ntBASIC15.24■□□□□ 0.03
USP8P40818 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.24■□□□□ 0.03
USP8P40818 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
USP8P40818 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.24■□□□□ 0.03
USP8P40818 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.24■□□□□ 0.03
USP8P40818 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.24■□□□□ 0.03
USP8P40818 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 RCC2P1-201ENST00000452257 1476 ntBASIC15.24■□□□□ 0.03
USP8P40818 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.24■□□□□ 0.03
USP8P40818 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
USP8P40818 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.24■□□□□ 0.03
USP8P40818 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.24■□□□□ 0.03
USP8P40818 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 PCDHB18P-202ENST00000526308 3197 ntBASIC15.24■□□□□ 0.03
USP8P40818 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USP8P40818 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
USP8P40818 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.23■□□□□ 0.03
USP8P40818 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 EIF4HP1-201ENST00000453115 687 ntBASIC15.23■□□□□ 0.03
USP8P40818 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USP8P40818 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.23■□□□□ 0.03
USP8P40818 AL451050.2-201ENST00000606967 682 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms